Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 1.7e-286 988.8 570 100.0
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 7.2e-131 471.9 589 56.7
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 8.5e-100 368.6 486 53.3
Ah.12g060820 Amaranthus hybridus HOM05D016866 ORTHO05D003816 3.0e-76 290.4 612 44.9
Ah.10g025600 Amaranthus hybridus HOM05D016866 ORTHO05D003816 3.6e-66 256.9 734 38.7
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 5.4e-62 243.0 555 35.5
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 4.6e-29 133.7 568 27.6
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 7.4e-19 99.8 210 36.7
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 3.4e-16 90.9 220 31.8
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.3e-15 89.0 356 25.8
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 8.5e-15 86.3 373 27.3
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.9e-14 85.1 338 25.1
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.5e-14 84.7 189 38.1
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.5e-14 84.7 189 38.1
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 4.2e-14 84.0 211 32.2
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.5e-14 83.6 203 31.5
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 5.5e-14 83.6 206 33.5
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 9.3e-14 82.8 420 24.0
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 1.2e-13 82.4 192 34.4
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.6e-13 82.0 415 24.6
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 2.1e-13 81.6 269 30.9
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.1e-13 81.6 361 27.4
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 2.7e-13 81.3 434 23.7
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 4.6e-13 80.5 234 29.5
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 4.6e-13 80.5 192 34.9
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 4.6e-13 80.5 366 27.3
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 7.9e-13 79.7 393 24.7
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.4e-12 79.0 205 33.7
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.8e-12 78.6 352 27.3
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 3.0e-12 77.8 230 33.5
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 3.9e-12 77.4 368 27.7
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 3.9e-12 77.4 218 30.3
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 3.9e-12 77.4 209 33.0
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 3.9e-12 77.4 237 30.8
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 6.7e-12 76.6 262 30.5
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 6.7e-12 76.6 350 27.7
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 6.7e-12 76.6 216 32.4
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 8.8e-12 76.3 319 26.3
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.5e-11 74.7 351 27.4
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 4.3e-11 73.9 462 26.2
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 1.3e-10 72.4 234 30.3
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.3e-10 72.4 235 26.4
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.3e-10 72.4 229 29.7
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 2.2e-10 71.6 295 24.4
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 2.8e-10 71.2 228 29.4
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 4.8e-10 70.5 242 28.5
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 6.3e-10 70.1 105 38.1
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 6.3e-10 70.1 213 27.7
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 8.2e-10 69.7 423 22.5
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 1.4e-09 68.9 489 24.5
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 1.8e-09 68.6 216 30.6
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.4e-09 68.2 197 32.0
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 5.3e-09 67.0 300 25.3
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 5.3e-09 67.0 484 24.0
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 5.3e-09 67.0 398 24.1
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.3e-09 67.0 320 26.2
Atru.chr6.1308 Acer truncatum HOM05D000650 ORTHO05D007302 6.9e-09 66.6 125 31.2
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 6.9e-09 66.6 199 30.2
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 6.9e-09 66.6 283 20.5
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 6.9e-09 66.6 199 26.6
Os09g0421700 Oryza sativa ssp. japonica HOM05D015084 ORTHO05D015160 6.9e-09 66.6 90 37.8
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 6.9e-09 66.6 233 32.2
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 9.1e-09 66.2 378 27.2
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 1.2e-08 65.9 97 38.1
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.5e-08 65.5 396 27.0
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 1.5e-08 65.5 189 34.9
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.5e-08 65.5 211 29.4
Rhsim02G0230700 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.5e-08 65.5 114 35.1
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 1.5e-08 65.5 101 37.6
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.0e-08 65.1 234 27.4
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 2.0e-08 65.1 71 47.9
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 3.4e-08 64.3 450 24.2
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 3.4e-08 64.3 74 47.3
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 3.4e-08 64.3 206 31.1
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 3.4e-08 64.3 92 39.1
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 4.5e-08 63.9 215 24.2
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 4.5e-08 63.9 197 33.5
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 4.5e-08 63.9 229 29.7
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 5.9e-08 63.5 259 28.2
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 7.7e-08 63.2 222 29.7
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 7.7e-08 63.2 76 48.7
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 7.7e-08 63.2 211 28.4
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.0e-07 62.8 421 22.8
Os09g0421600 Oryza sativa ssp. japonica HOM05D015084 ORTHO05D015160 1.0e-07 62.8 239 25.1
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 1.3e-07 62.4 364 29.4
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 1.3e-07 62.4 94 36.2
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 1.3e-07 62.4 219 30.6
Nitab4.5_0011705g0030 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.3e-07 62.4 89 41.6
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 1.3e-07 62.4 97 38.1
SalBow6G1286 Salvia bowleyana HOM05D000650 ORTHO05D007302 1.3e-07 62.4 398 22.4
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 1.7e-07 62.0 360 25.3
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.7e-07 62.0 202 30.7
TAR625G0371 Trochodendron aralioides HOM05D000650 ORTHO05D000735 1.7e-07 62.0 87 35.6
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 2.2e-07 61.6 345 25.2
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 2.9e-07 61.2 249 24.5
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 2.9e-07 61.2 173 29.5
Sc09g0010710 Simmondsia chinensis HOM05D016866 ORTHO05D003816 2.9e-07 61.2 183 26.8
VMungo0251G0586 Vigna mungo HOM05D000650 ORTHO05D007302 2.9e-07 61.2 115 33.9
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 3.8e-07 60.8 340 24.7
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 3.8e-07 60.8 119 37.0
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 5.0e-07 60.5 210 25.7
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 5.0e-07 60.5 323 23.5
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 5.0e-07 60.5 180 26.7
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 6.5e-07 60.1 317 24.0
Manes.07G043000 Manihot esculenta HOM05D000650 ORTHO05D007302 6.5e-07 60.1 202 21.3
Manes.07G043100 Manihot esculenta HOM05D000650 ORTHO05D015160 6.5e-07 60.1 224 21.4
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 8.5e-07 59.7 314 23.6
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 8.5e-07 59.7 190 28.4
Zm00001eb313050 Zea mays HOM05D015084 ORTHO05D015160 8.5e-07 59.7 105 31.4
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 1.1e-06 59.3 120 31.7
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 1.1e-06 59.3 425 23.3
Lj5A228T44 Lonicera japonica HOM05D003426 ORTHO05D007302 1.1e-06 59.3 134 29.1
DCAR_001849 Daucus carota HOM05D000650 ORTHO05D007302 1.4e-06 58.9 237 22.8
DCAR_029285 Daucus carota HOM05D000650 ORTHO05D007302 1.4e-06 58.9 205 22.0
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.4e-06 58.9 319 23.2
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.4e-06 58.9 192 29.2
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 1.9e-06 58.5 131 32.1
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 1.9e-06 58.5 202 29.2
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 1.9e-06 58.5 399 25.1
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.9e-06 58.5 237 29.1
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 1.9e-06 58.5 335 23.3
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.9e-06 58.5 67 49.3
Potri.001G283000 Populus trichocarpa HOM05D000650 ORTHO05D007302 1.9e-06 58.5 246 23.6
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 1.9e-06 58.5 315 23.5
Haze_10697 Corylus avellana HOM05D000650 ORTHO05D007302 2.5e-06 58.2 102 34.3
Psat2g065480 Pisum sativum HOM05D000650 ORTHO05D010020 2.5e-06 58.2 53 56.6
COL.COLO4_32413 Corchorus olitorius HOM05D000027 ORTHO05D001579 3.2e-06 57.8 102 31.4
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 4.2e-06 57.4 106 33.0
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 4.2e-06 57.4 153 27.5
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 5.5e-06 57.0 69 47.8
Potri.009G078500 Populus trichocarpa HOM05D000650 ORTHO05D007302 5.5e-06 57.0 114 33.3
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 5.5e-06 57.0 77 39.0
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 7.2e-06 56.6 471 22.5
RhsimUnG0162700 Rhododendron simsii HOM05D022929 ORTHO05D050680 7.2e-06 56.6 193 26.4
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 7.2e-06 56.6 122 30.3
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 7.2e-06 56.6 229 25.8
Lsat_1_v5_gn_5_89740 Lactuca sativa HOM05D003426 ORTHO05D003816 9.4e-06 56.2 247 29.1
Zm00001eb313060 Zea mays HOM05D031047 ORTHO05D015160 9.4e-06 56.2 301 24.3
Zm00001eb313090 Zea mays HOM05D031047 ORTHO05D015160 9.4e-06 56.2 301 24.3


User provided reference genes

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