Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 5.3e-84 314.3 159 100.0
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 7.7e-67 257.3 180 76.1
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.7e-66 256.1 156 83.3
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 8.0e-64 247.3 153 80.4
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 6.1e-56 221.1 121 91.7
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 5.2e-55 218.0 155 68.4
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 8.3e-53 210.7 153 67.3
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 7.0e-52 207.6 153 66.7
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 2.0e-51 206.1 152 65.1
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 3.5e-51 205.3 149 67.1
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.5e-51 205.3 154 61.7
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 4.6e-51 204.9 149 67.8
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.0e-50 203.8 149 66.4
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 1.7e-50 203.0 158 63.9
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 2.3e-50 202.6 152 66.4
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 3.9e-50 201.8 153 64.1
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 8.6e-50 200.7 149 63.8
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 1.5e-49 199.9 152 65.1
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 5.6e-49 198.0 150 63.3
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 5.6e-49 198.0 152 64.5
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 7.3e-49 197.6 152 63.8
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 9.5e-49 197.2 155 63.9
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.6e-48 196.4 151 62.9
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 4.7e-48 194.9 152 63.2
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 4.7e-48 194.9 157 60.5
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 8.0e-48 194.1 151 62.3
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 1.0e-47 193.7 151 63.6
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.8e-47 193.0 153 61.4
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.8e-47 193.0 145 64.1
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 3.1e-47 192.2 150 62.0
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.1e-47 192.2 159 60.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 5.2e-47 191.4 150 64.7
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 5.2e-47 191.4 151 62.9
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 5.2e-47 191.4 129 70.5
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 6.8e-47 191.0 145 64.1
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 6.8e-47 191.0 154 61.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.5e-46 189.9 148 61.5
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 3.4e-46 188.7 153 59.5
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 3.4e-46 188.7 146 61.0
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 3.4e-46 188.7 151 62.3
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 3.4e-46 188.7 146 61.0
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 3.4e-46 188.7 159 61.0
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 4.4e-46 188.3 152 57.9
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 5.8e-46 188.0 157 61.8
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 5.8e-46 188.0 150 60.7
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 1.3e-45 186.8 150 60.7
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.3e-45 186.8 152 59.9
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 2.2e-45 186.0 129 69.8
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 2.2e-45 186.0 151 61.6
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.2e-45 186.0 151 59.6
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 4.9e-45 184.9 145 61.4
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 4.9e-45 184.9 155 58.7
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.4e-45 184.5 147 60.5
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 8.3e-45 184.1 155 58.1
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.1e-44 183.7 151 59.6
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.1e-44 183.7 151 59.6
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.1e-44 183.7 151 59.6
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.4e-44 183.3 169 55.6
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.4e-44 183.3 159 57.2
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.9e-44 183.0 150 57.3
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 3.2e-44 182.2 150 60.0
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 4.1e-44 181.8 149 61.7
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 4.1e-44 181.8 151 59.6
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 5.4e-44 181.4 156 54.5
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 9.2e-44 180.6 150 61.3
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 9.2e-44 180.6 150 58.7
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 2.7e-43 179.1 184 48.9
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 3.5e-43 178.7 131 64.9
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 6.0e-43 177.9 144 61.1
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 1.3e-42 176.8 151 59.6
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 2.3e-42 176.0 128 68.0
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 2.3e-42 176.0 151 57.6
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.0e-42 175.6 146 57.5
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 3.0e-42 175.6 172 54.1
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.5e-41 173.3 149 57.0
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.5e-41 173.3 125 64.8
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 2.5e-41 172.6 146 55.5
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 4.3e-41 171.8 149 57.7
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 9.5e-41 170.6 119 66.4
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 2.8e-40 169.1 145 59.3
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.8e-40 169.1 151 56.3
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 6.2e-40 167.9 178 50.6
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.1e-39 167.2 131 62.6
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 4.0e-39 165.2 124 62.9
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 5.2e-39 164.9 127 63.8
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 2.0e-38 162.9 146 56.8
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 2.0e-38 162.9 146 56.8
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.1e-36 157.1 152 52.0
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 5.4e-36 154.8 120 62.5
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.2e-35 153.7 119 63.9
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 2.1e-35 152.9 144 52.8
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.1e-33 147.1 105 67.6
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 1.1e-33 147.1 155 52.3
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 4.0e-31 138.7 124 56.5
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 4.4e-30 135.2 111 55.0
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 7.6e-30 134.4 118 55.9
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 4.6e-27 125.2 151 45.7
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 2.3e-26 122.9 146 40.4
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 3.9e-26 122.1 146 42.5
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.8e-23 113.2 144 41.7
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 3.1e-23 112.5 82 65.9
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 8.9e-23 110.9 94 58.5
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.5e-22 110.2 127 43.3
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 4.4e-22 108.6 120 47.5
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.3e-21 107.1 90 60.0
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.1e-20 104.0 71 64.8
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.9e-20 103.2 71 67.6
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 4.2e-20 102.1 122 39.3
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.6e-19 100.1 80 61.2
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 6.0e-19 98.2 69 65.2
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 1.8e-15 86.7 70 58.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 4.0e-15 85.5 82 51.2
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.9e-12 76.6 98 40.8
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.9e-11 71.2 62 56.5
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 9.6e-09 64.3 60 53.3
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 8.1e-08 61.2 44 63.6


User provided reference genes

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