Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 3.1e-301 1037.7 548 100.0
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.1e-210 736.9 550 74.9
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.5e-207 726.5 551 73.9
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 2.8e-180 636.0 550 66.7
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 5.8e-162 575.1 550 60.9
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.1e-160 570.9 551 60.4
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 3.2e-160 569.3 553 61.1
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 3.0e-158 562.8 549 59.2
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 8.6e-158 561.2 549 59.0
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 5.6e-157 558.5 547 59.8
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 2.8e-156 556.2 552 58.9
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 6.2e-156 555.1 556 58.8
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 6.2e-156 555.1 551 59.2
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.8e-155 553.5 551 58.6
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 5.2e-155 552.0 550 58.4
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.5e-154 550.4 551 58.4
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 4.4e-154 548.9 561 56.9
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 9.9e-154 547.7 547 58.9
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.3e-153 547.4 551 56.4
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 6.4e-153 545.0 551 57.9
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 1.4e-152 543.9 550 59.1
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.4e-152 543.9 552 58.7
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 7.1e-152 541.6 555 57.7
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.2e-151 540.8 553 57.7
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 7.8e-151 538.1 549 58.1
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 3.9e-150 535.8 549 56.3
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 5.1e-150 535.4 548 57.3
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.1e-149 534.3 551 57.4
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 5.6e-149 531.9 550 56.5
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.6e-148 530.4 547 56.1
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 2.1e-148 530.0 549 56.5
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 2.1e-148 530.0 555 56.9
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 2.6e-146 523.1 551 56.4
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 7.6e-146 521.5 550 56.4
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 7.6e-146 521.5 550 56.4
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 7.6e-146 521.5 555 56.9
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.7e-145 520.4 550 55.3
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 2.9e-145 519.6 551 55.5
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 3.8e-145 519.2 555 55.9
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 8.4e-145 518.1 551 55.4
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 3.2e-144 516.2 552 55.8
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 3.2e-144 516.2 553 57.9
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 4.2e-144 515.8 550 55.1
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 7.1e-144 515.0 550 54.9
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 3.5e-143 512.7 551 55.2
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 6.0e-143 511.9 552 56.9
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 3.9e-142 509.2 549 55.0
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 3.9e-142 509.2 552 56.3
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 3.9e-142 509.2 554 56.5
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 5.1e-142 508.8 549 54.1
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.9e-141 506.9 554 54.7
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 4.3e-141 505.8 542 55.2
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 4.3e-141 505.8 545 53.9
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 5.6e-141 505.4 551 55.4
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 5.6e-141 505.4 552 54.3
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.3e-140 504.2 552 56.3
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.1e-140 503.4 551 53.9
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.4e-139 500.7 556 54.3
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 2.4e-139 500.0 550 53.3
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 2.4e-139 500.0 560 54.5
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.1e-139 499.6 551 54.3
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 4.0e-139 499.2 559 53.0
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 3.4e-138 496.1 549 55.0
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.7e-137 493.8 554 53.1
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 3.8e-137 492.7 553 54.4
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 7.1e-136 488.4 556 51.4
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 3.9e-134 482.6 551 51.9
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 7.3e-133 478.4 550 53.6
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 1.1e-131 474.6 556 52.5
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 1.4e-131 474.2 563 51.7
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 1.8e-131 473.8 550 53.8
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 4.0e-131 472.6 545 52.5
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 6.9e-131 471.9 555 52.1
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.2e-130 471.1 555 51.5
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 2.6e-130 469.9 559 51.7
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.7e-129 467.2 549 52.8
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 1.4e-128 464.2 561 51.0
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 2.5e-125 453.4 557 50.6
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 2.5e-125 453.4 554 49.1
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 5.6e-125 452.2 556 50.7
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 2.8e-124 449.9 563 49.6
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 9.0e-123 444.9 556 49.6
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 2.6e-122 443.4 555 50.1
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 1.0e-121 441.4 561 49.6
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 6.5e-121 438.7 552 49.6
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 3.5e-119 433.0 459 54.5
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 8.7e-118 428.3 557 48.8
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 3.3e-117 426.4 557 48.8
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 4.1e-115 419.5 559 47.6
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.5e-112 410.2 395 58.2
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 6.1e-111 405.6 553 47.0
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.3e-108 397.9 550 47.1
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 2.8e-108 396.7 557 47.0
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 9.7e-101 371.7 364 58.8
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.4e-99 367.9 398 55.0
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 2.6e-98 363.6 559 42.9
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.1e-96 358.2 366 57.7
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.6e-95 354.4 555 43.2
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 8.8e-94 348.6 572 42.0
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 5.2e-86 322.8 602 39.7
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.2e-71 275.0 358 48.6
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 5.2e-62 243.0 367 43.6
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 1.8e-54 218.0 236 53.4
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.9e-51 208.0 597 32.7
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 6.0e-42 176.4 206 53.9
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.3e-32 144.1 330 38.8
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 3.8e-28 130.6 166 47.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.9e-24 118.2 345 34.5
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 7.1e-19 99.8 126 49.2
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 3.0e-17 94.4 161 38.5
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 1.9e-08 65.1 52 57.7
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 3.7e-07 60.8 65 46.2
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 8.1e-07 59.7 58 48.3
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 1.1e-06 59.3 69 43.5
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 1.1e-06 59.3 56 55.4
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 1.4e-06 58.9 49 55.1
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 1.8e-06 58.5 59 52.5
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 2.4e-06 58.2 59 47.5
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 2.4e-06 58.2 49 57.1
Peaxi162Scf00347g00125 Petunia axillaris HOM05D004574 ORTHO05D005612 2.4e-06 58.2 49 55.1
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 2.4e-06 58.2 49 59.2
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 4.0e-06 57.4 46 63.0
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 4.0e-06 57.4 46 58.7
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 5.3e-06 57.0 49 53.1
TWI34G0786 Tripterygium wilfordii HOM05D004574 ORTHO05D005612 5.3e-06 57.0 46 58.7
DCAR_014931 Daucus carota HOM05D004574 ORTHO05D005612 6.9e-06 56.6 49 53.1
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 6.9e-06 56.6 65 43.1
Prupe.7G253700 Prunus persica HOM05D004574 ORTHO05D005612 6.9e-06 56.6 46 56.5
MSTRG.19628 Avicennia marina HOM05D004574 ORTHO05D005612 9.0e-06 56.2 70 45.7
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 9.0e-06 56.2 52 48.1
Eucgr.L03484 Eucalyptus grandis HOM05D004574 ORTHO05D005612 9.0e-06 56.2 47 53.2
vmacro21880 Vaccinium macrocarpon HOM05D004574 ORTHO05D005612 9.0e-06 56.2 49 53.1
HPP92_005314 Vanilla planifolia HOM05D004574 ORTHO05D005612 9.0e-06 56.2 69 39.1
HPP92_005340 Vanilla planifolia HOM05D004574 ORTHO05D005612 9.0e-06 56.2 69 39.1


User provided reference genes

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