Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02452 Beta vulgaris HOM05D001145 ORTHO05D008176 6.1e-32 140.2 70 100.0
Nn2g12480 Nelumbo nucifera HOM05D001145 ORTHO05D008176 6.5e-10 67.0 47 68.1
TPR.G1896 Trifolium pratense HOM05D001145 ORTHO05D008176 8.5e-10 66.6 47 66.0
Cfa013013 Carpinus fangiana HOM05D001145 ORTHO05D008176 1.1e-09 66.2 47 63.8
QL02p018077 Quercus lobata HOM05D001145 ORTHO05D008176 1.1e-09 66.2 47 66.0
Prupe.1G397100 Prunus persica HOM05D001145 ORTHO05D008176 1.5e-09 65.9 47 66.0
Glyma.04G059800 Glycine max HOM05D001145 ORTHO05D008176 1.9e-09 65.5 46 67.4
RcHm_v2.0_Chr6g0299151 Rosa chinensis HOM05D001145 ORTHO05D008176 1.9e-09 65.5 47 63.8
TWI34G0371 Tripterygium wilfordii HOM05D001145 ORTHO05D008176 1.9e-09 65.5 46 67.4
Lj7A738T100 Lonicera japonica HOM05D001145 ORTHO05D008176 2.5e-09 65.1 47 61.7
Nitab4.5_0000668g0080 Nicotiana tabacum HOM05D001145 ORTHO05D008176 2.5e-09 65.1 47 63.8
Actinidia06455 Actinidia chinensis HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
arahy.Tifrunner.gnm1.ann1.VKSA8D Arachis hypogaea HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
arahy.Tifrunner.gnm1.ann1.ZP8Y56 Arachis hypogaea HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
BcaB01g03000 Brassica carinata HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
A03p26990 Brassica napus HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
C03p32390 Brassica napus HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
BraA03t11910Z Brassica rapa HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
ECA246G4066 Erigeron canadensis HOM05D001145 ORTHO05D008176 3.2e-09 64.7 47 61.7
Thhalv10000113m.g Eutrema salsugineum HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
FvH4_2g41330 Fragaria vesca HOM05D001145 ORTHO05D008176 3.2e-09 64.7 47 61.7
FAN15G1263 Fragaria x ananassa HOM05D001145 ORTHO05D008176 3.2e-09 64.7 47 63.8
FAN27G3317 Fragaria x ananassa HOM05D001145 ORTHO05D008176 3.2e-09 64.7 47 63.8
PGR044G1085 Punica granatum HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
Rhsim02G0217900 Rhododendron simsii HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
Sp4g03840 Schrenkiella parvula HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
Hund02973 Selenicereus undatus HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
vmacro11276 Vaccinium macrocarpon HOM05D001145 ORTHO05D008176 3.2e-09 64.7 46 67.4
Ah.12g060390 Amaranthus hybridus HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 65.2
Cpa.g.sc148.47 Carica papaya HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 67.4
Ca_15787_v3 Cicer arietinum L. HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 65.2
Duzib187G1480 Durio zibethinus HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 65.2
Lalb_Chr08g0244481 Lupinus albus HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 65.2
Medtr3g105820 Medicago truncatula HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 65.2
Psat5g033120 Pisum sativum HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 65.2
Thecc.09G013700 Theobroma cacao HOM05D001145 ORTHO05D008176 4.2e-09 64.3 46 65.2
GSVIVG01036007001 Vitis vinifera HOM05D001145 ORTHO05D008176 4.2e-09 64.3 47 61.7
Aqoxy7G03277 Aquilegia oxysepala HOM05D001145 ORTHO05D008176 5.5e-09 63.9 47 61.7
Gohir.A05G060800 Gossypium hirsutum HOM05D001145 ORTHO05D008176 5.5e-09 63.9 46 65.2
Gohir.D05G063000 Gossypium hirsutum HOM05D001145 ORTHO05D008176 5.5e-09 63.9 46 65.2
Gorai.009G064000 Gossypium raimondii HOM05D001145 ORTHO05D008176 5.5e-09 63.9 46 65.2
Nitab4.5_0001110g0090 Nicotiana tabacum HOM05D001145 ORTHO05D008176 5.5e-09 63.9 47 61.7
AL4G15860 Arabidopsis lyrata HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 65.2
AT2G24820 Arabidopsis thaliana HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 65.2
Carub.0004s0444 Capsella rubella HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 65.2
CARHR294570 Cardamine hirsuta HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 65.2
Ciclev10007965m.g Citrus clementina HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 65.2
HanXRQChr17g0536341 Helianthus annuus HOM05D001145 ORTHO05D008176 7.2e-09 63.5 47 61.7
Lsat_1_v5_gn_3_22540 Lactuca sativa HOM05D001145 ORTHO05D008176 7.2e-09 63.5 47 61.7
Os02g0792800 Oryza sativa ssp. japonica HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 65.2
Potri.018G015700 Populus trichocarpa HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 63.0
Sabra18G0019000 Salix brachista HOM05D001145 ORTHO05D008176 7.2e-09 63.5 46 63.0
Atru.BG.19.p Acer truncatum HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 63.0
BolC3t15580H Brassica oleracea HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 65.2
Eucgr.C04031 Eucalyptus grandis HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 63.0
Lj1g0021239 Lotus japonicus HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 63.0
Phvul.009G086000 Phaseolus vulgaris HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 63.0
SGA_v2.0_scaffold27G11633 Striga asiatica HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 63.0
VMungo1309G0760 Vigna mungo HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 63.0
Zm00001eb257630 Zea mays HOM05D001145 ORTHO05D008176 9.4e-09 63.2 46 65.2
Aa31LG7G11580 Aethionema arabicum HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 65.2
CSS0018677 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 63.0
CSS0043219 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 63.0
CANSAT25G1628 Cannabis sativa HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 63.0
CDE07G1427 Ceratophyllum demersum HOM05D000821 ORTHO05D008176 1.2e-08 62.8 46 63.0
AUR62024771 Chenopodium quinoa HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 65.2
AUR62032447 Chenopodium quinoa HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 65.2
Rhsim02G0217800 Rhododendron simsii HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 65.2
Sc06g0000320 Simmondsia chinensis HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 65.2
Solyc12g096550.2 Solanum lycopersicum HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 63.0
Sopen12g032380 Solanum pennellii HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 63.0
PGSC0003DMG401029274 Solanum tuberosum HOM05D001145 ORTHO05D008176 1.2e-08 62.8 46 63.0
Sed0027737 Sechium edule HOM05D001145 ORTHO05D008176 1.6e-08 62.4 46 63.0
TWI32G0797 Tripterygium wilfordii HOM05D001145 ORTHO05D008176 1.6e-08 62.4 46 60.9
TAR626G1257 Trochodendron aralioides HOM05D001145 ORTHO05D008176 2.1e-08 62.0 45 64.4
HPP92_017165 Vanilla planifolia HOM05D001145 ORTHO05D008176 2.1e-08 62.0 46 63.0
EL10Ac2g02451 Beta vulgaris HOM05D001145 ORTHO05D008176 2.7e-08 61.6 46 65.2
CSS0007167 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 2.7e-08 61.6 46 63.0
CSS0034347 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 2.7e-08 61.6 46 63.0
CDE04G1965 Ceratophyllum demersum HOM05D001145 ORTHO05D008176 2.7e-08 61.6 46 60.9
Dinv16415 Davidia involucrata HOM05D001145 ORTHO05D008176 2.7e-08 61.6 67 46.3
Oeu048541.1 Olea europaea HOM05D001145 ORTHO05D008176 2.7e-08 61.6 46 60.9
Peaxi162Scf00459g00119 Petunia axillaris HOM05D001145 ORTHO05D008176 2.7e-08 61.6 46 60.9
DCAR_004584 Daucus carota HOM05D001145 ORTHO05D008176 3.6e-08 61.2 46 60.9
Glyma.06G060200 Glycine max HOM05D001145 ORTHO05D008176 3.6e-08 61.2 46 63.0
Manes.16G132300 Manihot esculenta HOM05D001145 ORTHO05D008176 3.6e-08 61.2 46 60.9
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 3.6e-08 61.2 46 58.7
Migut.A00391 Erythranthe guttata HOM05D001145 ORTHO05D008176 4.7e-08 60.8 46 58.7
Hma1.2p1_0392F.1_g142980 Hydrangea macrophylla HOM05D001145 ORTHO05D008176 4.7e-08 60.8 46 60.9
PSO063G6900 Papaver somniferum HOM05D001145 ORTHO05D008176 6.1e-08 60.5 46 63.0
PSO782G5236 Papaver somniferum HOM05D001145 ORTHO05D008176 6.1e-08 60.5 46 63.0
Potri.006G267300 Populus trichocarpa HOM05D001145 ORTHO05D008176 6.1e-08 60.5 45 62.2
Sabra06G0209600 Salix brachista HOM05D001145 ORTHO05D008176 6.1e-08 60.5 45 62.2
Ciclev10007702m.g Citrus clementina HOM05D001145 ORTHO05D008176 1.0e-07 59.7 46 60.9
CiPaw.08G004400 Carya illinoinensis HOM05D001145 ORTHO05D008176 1.4e-07 59.3 47 61.7
MELO3C016944.2 Cucumis melo HOM05D001145 ORTHO05D008176 1.4e-07 59.3 46 58.7
CsaV3_4G036370 Cucumis sativus L. HOM05D001145 ORTHO05D008176 1.4e-07 59.3 46 58.7
ATR0580G386 Amborella trichopoda HOM05D001145 ORTHO05D008176 2.3e-07 58.5 46 58.7
MBI15_g07484_MAGBIO Magnolia biondii HOM05D001145 ORTHO05D008176 2.3e-07 58.5 46 60.9
CAN.G566.49 Capsicum annuum HOM05D001145 ORTHO05D008176 3.0e-07 58.2 46 58.7
CiPaw.07G232800 Carya illinoinensis HOM05D001145 ORTHO05D008176 3.0e-07 58.2 46 58.7
THA.LOC104803608 Tarenaya hassleriana HOM05D001145 ORTHO05D008176 3.0e-07 58.2 46 56.5
MD08G1051400 Malus domestica HOM05D001145 ORTHO05D008176 5.2e-07 57.4 45 62.2
Cc08_g06700 Coffea canephora HOM05D001145 ORTHO05D008176 1.5e-06 55.8 46 58.7
Prupe.1G397200 Prunus persica HOM05D001145 ORTHO05D008176 1.5e-06 55.8 45 57.8
ClCG05G016090 Citrullus lanatus HOM05D001145 ORTHO05D008176 3.3e-06 54.7 46 58.7


User provided reference genes

Program Settings