Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 1.3e-169 599.7 321 100.0
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 5.1e-126 454.9 307 76.2
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.8e-110 403.3 312 67.3
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 1.1e-109 400.6 313 65.8
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 9.7e-109 397.5 302 73.2
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 9.7e-109 397.5 312 67.0
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.3e-108 397.1 312 68.3
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.8e-108 396.0 312 67.0
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 3.7e-108 395.6 312 66.7
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 3.7e-108 395.6 326 66.9
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 9.0e-107 391.0 315 66.7
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.6e-106 389.4 314 66.2
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 4.5e-106 388.7 314 64.6
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 4.5e-106 388.7 313 63.3
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 5.0e-105 385.2 313 63.3
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 8.5e-105 384.4 313 63.3
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.4e-104 383.6 313 63.3
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.4e-104 383.6 313 63.3
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.9e-104 383.3 323 63.8
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.9e-104 383.3 313 64.5
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.9e-104 383.3 318 64.8
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.5e-104 382.9 318 65.4
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.5e-104 382.9 313 62.9
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 4.2e-104 382.1 317 64.4
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 4.2e-104 382.1 314 63.1
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 4.2e-104 382.1 313 64.2
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 4.2e-104 382.1 314 65.3
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 9.4e-104 380.9 284 68.3
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.6e-103 380.2 313 62.6
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.1e-103 379.8 313 62.9
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.7e-103 379.4 313 64.5
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 7.9e-103 377.9 313 63.9
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 7.9e-103 377.9 313 63.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 1.0e-102 377.5 328 62.5
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.0e-102 377.5 312 63.8
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 3.0e-102 375.9 315 63.5
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 3.0e-102 375.9 323 61.3
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 3.0e-102 375.9 333 63.1
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 1.1e-101 374.0 323 60.7
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.1e-101 374.0 314 63.7
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.1e-101 374.0 312 63.8
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.1e-101 374.0 318 63.5
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 2.5e-101 372.9 323 61.6
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.3e-100 370.5 312 63.8
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.3e-100 370.5 319 63.6
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.3e-100 370.5 319 63.6
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.4e-99 367.1 311 61.4
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 3.1e-99 365.9 314 62.4
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 3.1e-99 365.9 314 64.6
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 9.1e-99 364.4 323 61.3
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 1.5e-98 363.6 323 61.0
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.0e-98 363.2 309 64.1
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 2.0e-98 363.2 323 61.9
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 4.5e-98 362.1 312 62.2
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 4.5e-98 362.1 323 60.7
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 7.7e-98 361.3 323 60.4
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 7.7e-98 361.3 325 60.6
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 1.0e-97 360.9 282 66.7
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 1.0e-97 360.9 325 60.6
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.9e-97 359.4 320 60.3
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 6.5e-97 358.2 320 60.3
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 1.4e-96 357.1 311 61.1
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 2.5e-96 356.3 325 60.0
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 3.2e-96 355.9 319 61.8
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 7.2e-96 354.8 326 59.8
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 7.2e-96 354.8 326 59.8
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 7.2e-96 354.8 277 65.7
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 9.4e-96 354.4 325 59.7
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 9.4e-96 354.4 325 59.7
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.9e-94 349.0 310 61.3
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.1e-93 347.4 315 62.2
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 2.2e-92 343.2 318 61.9
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 4.8e-92 342.0 419 50.1
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.5e-90 337.0 313 59.7
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.3e-89 334.0 321 60.4
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 5.0e-89 332.0 384 51.3
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.9e-88 330.1 265 66.8
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 4.7e-87 325.5 318 57.5
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.5e-85 320.5 280 65.4
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 2.6e-85 319.7 315 57.5
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.3e-84 317.4 303 56.8
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 3.7e-84 315.8 276 62.7
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 4.8e-84 315.5 320 53.4
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 7.0e-83 311.6 282 64.5
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 7.7e-82 308.1 312 51.9
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.9e-80 303.5 311 52.4
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 7.2e-80 301.6 268 60.1
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 2.1e-79 300.1 263 62.0
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.4e-78 297.4 256 64.8
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 2.3e-78 296.6 343 52.2
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.0e-77 293.5 255 60.0
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 1.3e-76 290.8 285 56.8
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.6e-74 283.9 253 61.7
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 5.0e-73 278.9 315 48.3
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 7.2e-72 275.0 287 48.8
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 2.6e-69 266.5 250 59.6
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 2.8e-68 263.1 263 51.3
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 3.7e-60 236.1 307 46.3
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.4e-54 217.6 644 29.5
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.8e-54 217.2 207 56.0
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 2.0e-53 213.8 154 67.5
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 7.5e-53 211.8 323 46.1
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 4.6e-50 202.6 168 63.7
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 8.6e-49 198.4 216 48.1
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 2.6e-45 186.8 189 49.7
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 9.2e-43 178.3 148 61.5
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 3.5e-42 176.4 147 61.9
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 3.9e-41 172.9 235 47.7
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 5.1e-41 172.6 128 68.8
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.5e-40 171.0 170 50.0
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.2e-38 162.5 312 38.8
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.2e-37 161.4 87 88.5
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.2e-37 161.4 125 64.8
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 3.0e-33 146.7 108 68.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 1.7e-28 131.0 108 61.1
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 2.4e-27 127.1 147 45.6
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.6e-23 114.4 74 73.0
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 8.4e-20 102.1 285 31.2
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 8.1e-15 85.5 273 27.5
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 3.3e-08 63.5 52 65.4
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 1.3e-07 61.6 359 23.4
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.7e-07 60.1 49 53.1
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.8e-06 57.8 57 56.1
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 4.0e-06 56.6 53 58.5
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 4.0e-06 56.6 60 53.3


User provided reference genes

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