Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02375 Beta vulgaris HOM05D052183 ORTHO05D003637 7.0e-76 287.3 160 100.0
AUR62022481 Chenopodium quinoa HOM05D052183 ORTHO05D003637 2.3e-26 122.9 156 51.3
Sc02g0007900 Simmondsia chinensis HOM05D003282 ORTHO05D003637 1.9e-12 76.6 158 34.2
Nitab4.5_0002314g0080 Nicotiana tabacum HOM05D003282 ORTHO05D003637 7.4e-09 64.7 112 36.6
QL12p038149 Quercus lobata HOM05D003282 ORTHO05D003637 9.7e-09 64.3 129 31.8
vmacro22051 Vaccinium macrocarpon HOM05D003282 ORTHO05D003637 1.6e-08 63.5 87 36.8
Peaxi162Scf00081g00214 Petunia axillaris HOM05D003282 ORTHO05D003637 2.2e-08 63.2 100 39.0
Nitab4.5_0002484g0080 Nicotiana tabacum HOM05D003282 ORTHO05D003637 3.7e-08 62.4 68 45.6
Ah.05g167090 Amaranthus hybridus HOM05D003282 ORTHO05D003637 4.8e-08 62.0 75 36.0
Nitab4.5_0008551g0010 Nicotiana tabacum HOM05D003282 ORTHO05D003637 4.8e-08 62.0 101 36.6
Actinidia22697 Actinidia chinensis HOM05D003282 ORTHO05D003637 6.3e-08 61.6 59 45.8
Cfa013774 Carpinus fangiana HOM05D003282 ORTHO05D003637 1.1e-07 60.8 81 37.0
Peaxi162Scf00160g00052 Petunia axillaris HOM05D003282 ORTHO05D003637 1.4e-07 60.5 78 39.7
Cc10_g04990 Coffea canephora HOM05D003282 ORTHO05D003637 4.1e-07 58.9 68 39.7
Nitab4.5_0004654g0010 Nicotiana tabacum HOM05D003282 ORTHO05D003637 4.1e-07 58.9 153 32.0
Oeu016577.1 Olea europaea HOM05D003282 ORTHO05D003637 4.1e-07 58.9 90 33.3
Atru.chr13.836 Acer truncatum HOM05D003282 ORTHO05D003637 5.3e-07 58.5 62 40.3
Oeu038172.1 Olea europaea HOM05D003282 ORTHO05D003637 5.3e-07 58.5 174 28.2
Rhsim07G0219700 Rhododendron simsii HOM05D003282 ORTHO05D003637 6.9e-07 58.2 166 27.7
PGSC0003DMG400010618 Solanum tuberosum HOM05D003282 ORTHO05D003637 6.9e-07 58.2 64 46.9
CAN.G724.28 Capsicum annuum HOM05D003282 ORTHO05D003637 9.0e-07 57.8 68 45.6
Oeu037484.1 Olea europaea HOM05D003282 ORTHO05D003637 9.0e-07 57.8 68 38.2
Sabra02G0092800 Salix brachista HOM05D003282 ORTHO05D003637 9.0e-07 57.8 71 42.3
Sopen04g031410 Solanum pennellii HOM05D003282 ORTHO05D003637 9.0e-07 57.8 68 48.5
Haze_22432 Corylus avellana HOM05D003282 ORTHO05D003637 1.2e-06 57.4 72 38.9
Lsat_1_v5_gn_6_110941 Lactuca sativa HOM05D003282 ORTHO05D003637 1.2e-06 57.4 82 31.7
Lalb_Chr14g0368171 Lupinus albus HOM05D003282 ORTHO05D003637 1.2e-06 57.4 94 36.2
Actinidia10202 Actinidia chinensis HOM05D000139 ORTHO05D009860 1.5e-06 57.0 154 28.6
CiPaw.07G174500 Carya illinoinensis HOM05D003282 ORTHO05D003637 1.5e-06 57.0 74 35.1
HanXRQChr05g0150961 Helianthus annuus HOM05D003282 ORTHO05D003637 1.5e-06 57.0 60 36.7
Solyc04g077810.1 Solanum lycopersicum HOM05D003282 ORTHO05D003637 2.0e-06 56.6 57 49.1
Thecc.05G238800 Theobroma cacao HOM05D003282 ORTHO05D003637 2.0e-06 56.6 146 30.8
HPP92_023657 Vanilla planifolia HOM05D003282 ORTHO05D003637 2.0e-06 56.6 88 31.8
Cpa.g.sc142.29 Carica papaya HOM05D003282 ORTHO05D003637 3.4e-06 55.8 60 45.0
Manes.18G046800 Manihot esculenta HOM05D003282 ORTHO05D003637 3.4e-06 55.8 70 38.6
Sabra14G0009700 Salix brachista HOM05D003282 ORTHO05D003637 3.4e-06 55.8 68 41.2
AUR62022478 Chenopodium quinoa HOM05D003282 ORTHO05D003637 4.5e-06 55.5 75 37.3
COL.COLO4_07066 Corchorus olitorius HOM05D003282 ORTHO05D003637 4.5e-06 55.5 102 32.4
Sed0008207 Sechium edule HOM05D003282 ORTHO05D003637 4.5e-06 55.5 70 37.1
Sc02g0007910 Simmondsia chinensis HOM05D003282 ORTHO05D003637 4.5e-06 55.5 162 30.2
AUR62037413 Chenopodium quinoa HOM05D003282 ORTHO05D003637 7.7e-06 54.7 75 36.0
Glyma.14G089021 Glycine max HOM05D003282 ORTHO05D003637 7.7e-06 54.7 97 35.1
Gohir.A06G024200 Gossypium hirsutum HOM05D003282 ORTHO05D003637 7.7e-06 54.7 82 36.6


User provided reference genes

Program Settings