Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 0.0e+00 1090.1 538 100.0
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 4.5e-252 874.4 538 79.2
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.0e-248 861.7 538 77.7
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 2.9e-227 792.0 540 72.6
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.2e-215 753.4 457 78.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 4.9e-190 668.3 540 59.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.7e-187 659.8 541 57.9
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 4.3e-186 655.2 543 58.9
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.8e-184 649.8 542 57.9
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.2e-183 647.1 542 57.2
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 7.6e-183 644.4 541 58.2
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 5.4e-181 638.3 541 55.6
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 7.1e-181 637.9 542 56.6
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 9.3e-181 637.5 544 58.3
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 2.1e-180 636.3 567 53.8
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.1e-180 636.3 542 56.5
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 3.5e-180 635.6 544 57.7
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 6.0e-180 634.8 542 56.5
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 6.0e-180 634.8 543 56.7
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 7.9e-180 634.4 542 56.3
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.1e-178 630.6 542 55.7
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 4.3e-178 628.6 544 57.5
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 1.6e-177 626.7 544 56.4
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 6.2e-177 624.8 543 56.7
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 6.2e-177 624.8 542 55.9
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.1e-176 624.0 543 56.7
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.4e-176 623.6 543 56.5
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.8e-176 623.2 543 56.5
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 1.8e-176 623.2 542 55.9
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 9.0e-176 620.9 541 54.3
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 2.6e-175 619.4 543 56.2
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 2.2e-174 616.3 542 54.1
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 6.5e-174 614.8 541 54.5
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 6.5e-174 614.8 541 54.3
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.4e-173 613.6 542 55.2
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 3.2e-173 612.5 543 54.5
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 2.1e-172 609.8 541 53.0
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 7.9e-172 607.8 550 54.7
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 7.9e-172 607.8 539 53.8
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 8.7e-171 604.4 577 53.4
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 2.8e-169 599.4 542 53.1
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.4e-168 597.0 538 52.8
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.8e-168 596.7 543 53.0
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 3.1e-168 595.9 541 53.2
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 4.0e-168 595.5 541 53.6
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 5.3e-168 595.1 546 53.3
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.2e-167 594.0 540 52.4
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.2e-167 594.0 538 52.4
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.5e-167 593.6 538 52.2
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.2e-166 589.7 541 53.6
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 6.5e-166 588.2 543 51.9
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 1.4e-165 587.0 545 52.5
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.9e-165 586.6 541 53.8
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 3.2e-165 585.9 543 52.9
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 3.2e-165 585.9 541 52.1
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 4.2e-165 585.5 541 54.2
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.3e-163 580.5 542 54.1
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 8.7e-163 577.8 539 51.8
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 2.5e-162 576.2 541 52.1
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 3.3e-162 575.9 539 51.6
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 4.3e-162 575.5 543 50.5
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 5.7e-162 575.1 541 51.8
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 3.7e-161 572.4 599 48.2
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.8e-160 570.1 539 50.8
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 3.1e-160 569.3 540 51.5
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.1e-160 569.3 542 52.2
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 4.5e-159 565.5 543 51.4
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 5.9e-159 565.1 564 49.6
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 1.3e-158 563.9 538 50.7
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.7e-158 563.5 550 51.1
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 1.7e-158 563.5 538 50.9
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.9e-157 560.1 544 53.5
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 2.5e-157 559.7 550 50.9
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 2.5e-157 559.7 540 52.8
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 9.4e-157 557.8 527 52.6
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 1.2e-156 557.4 538 50.2
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 4.6e-156 555.4 538 50.0
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 1.0e-155 554.3 542 49.3
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 5.1e-155 552.0 539 50.1
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 2.5e-154 549.7 537 50.8
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.1e-152 544.3 541 49.7
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.4e-152 543.9 472 56.8
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 4.1e-152 542.3 490 53.9
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.2e-149 532.3 630 44.1
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 5.5e-149 531.9 487 51.7
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 4.4e-146 522.3 541 47.1
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.1e-144 517.7 430 57.7
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.8e-144 516.9 594 46.6
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 6.1e-140 501.9 400 61.0
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 6.7e-139 498.4 561 47.6
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 3.3e-138 496.1 544 46.7
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 5.7e-130 468.8 558 45.2
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 3.5e-127 459.5 466 48.1
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 4.5e-127 459.1 448 49.6
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.7e-126 457.2 470 48.3
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.7e-126 457.2 554 44.2
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 2.1e-124 450.3 541 46.2
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 6.3e-121 438.7 552 42.8
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 3.4e-114 416.4 478 44.8
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.9e-113 413.3 310 64.5
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.1e-91 340.1 564 36.7
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.4e-83 313.9 557 33.8
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 6.8e-83 312.4 574 33.1
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.3e-78 297.4 220 66.4
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 6.9e-75 285.8 484 35.3
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.3e-73 281.6 574 32.9
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 5.4e-72 276.2 566 32.5
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 5.8e-58 229.6 209 53.1
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 7.9e-47 192.6 181 50.8
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 2.4e-43 181.0 252 35.3
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.1e-40 172.2 108 72.2
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 6.3e-28 129.8 197 39.1
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 3.8e-25 120.6 76 71.1
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 7.2e-24 116.3 119 36.1
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 3.2e-16 90.9 58 65.5
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 3.6e-15 87.4 123 38.2
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 2.2e-12 78.2 124 38.7
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 2.9e-09 67.8 131 32.8
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 9.5e-08 62.8 187 26.2
Ah.15g090560 Amaranthus hybridus HOM05D006431 ORTHO05D007918 1.6e-07 62.0 128 30.5
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.6e-07 62.0 37 73.0
COL.COLO4_29622 Corchorus olitorius HOM05D006431 ORTHO05D007918 2.1e-07 61.6 209 24.9
AUR62006262 Chenopodium quinoa HOM05D006431 ORTHO05D007918 1.4e-06 58.9 131 29.0
Sc02g0000490 Simmondsia chinensis HOM05D006431 ORTHO05D007918 2.3e-06 58.2 134 29.9
AUR62028512 Chenopodium quinoa HOM05D006431 ORTHO05D007918 4.0e-06 57.4 131 28.2


User provided reference genes

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