Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02203 Beta vulgaris HOM05D004909 ORTHO05D009625 0.0e+00 1125.2 561 100.0
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 1.2e-98 364.8 623 36.9
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 2.5e-96 357.1 606 37.8
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 4.9e-84 316.2 595 36.6
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 2.5e-75 287.3 607 33.9
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 1.2e-74 285.0 604 33.9
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 5.5e-67 259.6 614 32.1
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 3.9e-57 226.9 440 35.5
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 3.3e-56 223.8 351 40.5
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 3.3e-56 223.8 351 40.5
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.1e-54 217.2 533 31.5
RcHm_v2.0_MTg0498751 Rosa chinensis HOM05D004909 ORTHO05D009625 3.7e-47 193.7 437 32.5
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 8.2e-47 192.6 533 30.2
Hma1.2p1_0295F.1_g116730 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 3.5e-45 187.2 246 47.2
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 4.5e-45 186.8 219 48.4
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 5.0e-44 183.3 263 42.6
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 1.5e-43 181.8 217 51.6
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 1.2e-42 178.7 221 48.0
EL10As7g23793 Beta vulgaris HOM05D004909 ORTHO05D009928 1.6e-42 178.3 286 36.4
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 5.2e-41 173.3 572 27.8
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 1.2e-40 172.2 285 39.3
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 9.8e-40 169.1 419 31.3
CAN.G1001.42 Capsicum annuum HOM05D004909 ORTHO05D009625 1.1e-38 165.6 257 39.3
AUR62044037 Chenopodium quinoa HOM05D004909 ORTHO05D009625 5.0e-36 156.8 189 43.4
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 3.8e-28 130.6 262 38.2
EL10Ac1g00651 Beta vulgaris HOM05D004909 ORTHO05D009625 8.0e-26 122.9 178 40.4
SHI49389 Sapria himalayana HOM05D004909 ORTHO05D009625 5.8e-24 116.7 255 34.1
SHI35986 Sapria himalayana HOM05D004909 ORTHO05D009625 9.8e-24 115.9 234 38.0
SHI49457 Sapria himalayana HOM05D004909 ORTHO05D009625 1.3e-23 115.5 229 36.2
SHI40430 Sapria himalayana HOM05D004909 ORTHO05D009625 1.1e-22 112.5 233 36.5
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 1.0e-20 105.9 174 43.1
Duzib116G0563 Durio zibethinus HOM05D004909 ORTHO05D009625 4.4e-16 90.5 357 24.6
SHI41761 Sapria himalayana HOM05D004909 ORTHO05D009625 4.4e-16 90.5 183 36.1
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 1.9e-14 85.1 184 35.9
SHI43987 Sapria himalayana HOM05D004909 ORTHO05D009625 7.8e-13 79.7 137 39.4
SHI35576 Sapria himalayana HOM05D004909 ORTHO05D009625 3.9e-12 77.4 95 47.4
SEGI_03043 Sequoiadendron giganteum HOM05D004909 ORTHO05D019368 3.9e-12 77.4 189 29.6
CAN.G335.18 Capsicum annuum HOM05D004909 ORTHO05D009625 4.3e-11 73.9 148 36.5
CsaV3_UNG207880 Cucumis sativus L. HOM05D004909 ORTHO05D009625 5.2e-09 67.0 109 32.1
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 4.4e-08 63.9 77 49.4
SHI51920 Sapria himalayana HOM05D009967 ORTHO05D009625 1.9e-06 58.5 84 45.2
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 3.2e-06 57.8 76 47.4
SGA_v2.0_scaffold255G45542 Striga asiatica HOM05D004909 ORTHO05D009625 3.2e-06 57.8 43 65.1


User provided reference genes

Program Settings