Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 6.1e-241 837.0 409 100.0
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 6.0e-180 634.4 366 83.1
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 2.4e-157 559.3 366 75.4
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.4e-144 516.9 355 67.6
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 3.1e-144 515.8 356 66.0
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 5.3e-144 515.0 356 66.6
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 5.3e-144 515.0 356 66.6
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.5e-143 513.5 368 69.3
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 7.6e-143 511.1 356 66.6
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 6.5e-142 508.1 356 66.3
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 2.3e-139 499.6 362 64.6
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.5e-138 496.1 361 63.7
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 3.3e-138 495.7 361 64.3
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 5.7e-138 495.0 359 65.2
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 7.4e-138 494.6 355 64.2
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 7.4e-138 494.6 361 63.4
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.8e-137 492.7 356 63.5
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.8e-137 492.7 326 73.3
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 3.1e-136 489.2 354 62.7
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 6.9e-136 488.0 359 64.9
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.5e-135 486.9 359 63.0
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 3.4e-135 485.7 352 65.6
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.3e-134 483.8 358 63.7
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.7e-134 483.4 358 63.7
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.7e-134 483.4 358 63.7
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.2e-134 483.0 358 63.1
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.9e-134 482.6 357 63.3
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 3.8e-134 482.3 358 63.7
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 5.0e-134 481.9 351 65.2
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 6.5e-134 481.5 359 63.2
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 6.5e-134 481.5 356 63.2
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 8.5e-134 481.1 344 65.1
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 8.5e-134 481.1 357 62.7
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.1e-133 480.7 354 63.8
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.9e-133 479.9 359 63.2
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 2.5e-133 479.6 354 62.1
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 3.2e-133 479.2 360 62.8
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 3.2e-133 479.2 375 60.5
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 3.2e-133 479.2 356 64.9
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 3.2e-133 479.2 356 62.4
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 3.2e-133 479.2 360 63.6
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.2e-132 477.2 351 65.5
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.6e-132 476.9 357 62.5
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.8e-131 473.4 351 63.8
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 2.3e-131 473.0 364 60.7
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 5.1e-131 471.9 357 64.1
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 1.1e-130 470.7 358 61.5
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.1e-130 470.7 356 62.1
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 1.5e-130 470.3 351 62.1
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.5e-130 470.3 354 61.9
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 2.5e-130 469.5 351 61.3
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 4.3e-130 468.8 358 61.5
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.3e-129 467.2 357 62.2
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 3.7e-129 465.7 354 60.7
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 3.7e-129 465.7 351 61.3
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 6.3e-129 464.9 402 57.2
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.4e-128 463.8 369 61.8
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.1e-128 462.6 354 62.1
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 2.0e-127 459.9 356 61.2
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.0e-127 459.9 402 55.5
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 5.9e-127 458.4 371 60.6
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.7e-126 456.8 339 66.1
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.2e-126 456.4 339 65.8
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 8.5e-126 454.5 356 59.8
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 5.5e-125 451.8 357 57.4
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 7.2e-125 451.4 358 60.9
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 7.9e-124 448.0 359 60.2
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.4e-123 447.2 359 59.9
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.8e-123 446.8 358 61.5
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 3.0e-123 446.0 329 65.0
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.7e-121 440.3 349 58.5
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 3.7e-121 439.1 356 59.6
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 6.3e-121 438.3 356 59.6
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.4e-120 437.2 360 59.7
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 3.1e-120 436.0 356 59.6
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 7.0e-120 434.9 361 58.7
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 9.1e-120 434.5 356 59.0
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 5.9e-119 431.8 359 59.6
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 5.0e-118 428.7 356 58.4
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 6.5e-118 428.3 321 64.8
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.2e-116 424.1 357 58.3
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.2e-116 424.1 357 58.3
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.4e-115 420.6 358 56.1
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.3e-115 419.9 356 56.5
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 3.9e-115 419.1 302 65.2
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-114 417.5 356 55.6
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.3e-113 414.1 356 56.2
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 6.3e-113 411.8 353 55.2
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.1e-112 411.0 354 55.4
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.2e-111 407.5 332 58.4
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.0e-111 406.8 379 53.8
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.2e-110 403.3 356 55.9
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 5.0e-110 402.1 357 52.9
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 3.2e-109 399.4 358 50.6
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.5e-109 398.7 304 62.5
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 1.8e-107 393.7 356 53.9
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 1.5e-106 390.6 361 54.8
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 2.8e-105 386.3 356 52.8
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.1e-104 384.4 282 63.8
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.2e-102 376.7 354 55.1
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 1.5e-101 374.0 253 66.8
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 1.5e-98 364.0 287 61.0
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 2.0e-95 353.6 396 47.7
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 2.7e-95 353.2 239 69.5
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 7.2e-93 345.1 260 62.7
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 4.1e-88 329.3 282 55.7
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 5.9e-87 325.5 366 45.1
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 5.6e-85 318.9 357 47.1
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.1e-84 317.0 340 47.6
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.7e-81 307.4 204 71.6
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.7e-79 300.1 353 42.8
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 7.3e-77 292.0 351 43.0
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 5.1e-70 269.2 196 64.3
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 1.6e-68 264.2 146 82.2
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 3.9e-62 243.0 369 34.1
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 2.5e-61 240.4 191 58.6
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 4.3e-61 239.6 163 66.3
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.4e-48 198.0 170 53.5
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.3e-33 148.3 199 42.2
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.3e-28 131.7 86 74.4
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 2.1e-28 131.0 108 53.7
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 6.9e-27 125.9 113 54.0
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 6.3e-12 76.3 79 48.1
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 8.5e-09 65.9 137 31.4


User provided reference genes

Program Settings