Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02104 Beta vulgaris HOM05D000003 ORTHO05D011611 1.1e-95 353.2 172 100.0
Nitab4.5_0000151g0420 Nicotiana tabacum HOM05D000003 ORTHO05D011611 5.5e-18 95.1 72 62.5
Nitab4.5_0001519g0110 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.7e-17 92.8 78 51.3
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 6.1e-17 91.7 90 47.8
CANSAT78G1995 Cannabis sativa HOM05D000003 ORTHO05D000007 1.8e-16 90.1 70 55.7
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 2.3e-16 89.7 71 46.5
EL10As3g23356 Beta vulgaris HOM05D000003 ORTHO05D000007 2.3e-16 89.7 88 46.6
EL10Ac6g14081 Beta vulgaris HOM05D000003 ORTHO05D000007 5.1e-16 88.6 70 47.1
EL10Ac8g19433 Beta vulgaris HOM05D000003 ORTHO05D000007 6.7e-16 88.2 82 40.2
Nitab4.5_0004011g0050 Nicotiana tabacum HOM05D000003 ORTHO05D011611 6.7e-16 88.2 68 57.4
EL10Ac3g06546 Beta vulgaris HOM05D000003 ORTHO05D000007 8.8e-16 87.8 79 44.3
EL10Ac5g11620 Beta vulgaris HOM05D000003 ORTHO05D000007 1.1e-15 87.4 75 41.3
Nitab4.5_0005442g0030 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.5e-15 87.0 72 55.6
EL10Ac9g22997 Beta vulgaris HOM05D000003 ORTHO05D000007 2.0e-15 86.7 82 39.0
Nitab4.5_0003024g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.6e-15 86.3 64 56.2
EL10Ac7g17172 Beta vulgaris HOM05D000003 ORTHO05D000007 3.3e-15 85.9 88 44.3
EL10Ac7g17199 Beta vulgaris HOM05D000003 ORTHO05D000007 3.3e-15 85.9 69 49.3
EL10Ac1g02040 Beta vulgaris HOM05D000003 ORTHO05D000007 4.4e-15 85.5 72 45.8
EL10Ac4g09212 Beta vulgaris HOM05D000003 ORTHO05D000007 4.4e-15 85.5 63 58.7
EL10Ac6g14322 Beta vulgaris HOM05D000003 ORTHO05D000007 4.4e-15 85.5 125 32.8
CAN.G1463.3 Capsicum annuum HOM05D000479 ORTHO05D000007 4.4e-15 85.5 80 47.5
Nitab4.5_0000151g0430 Nicotiana tabacum HOM05D000003 ORTHO05D011611 7.4e-15 84.7 66 54.5
CANSAT11G0988 Cannabis sativa HOM05D000003 ORTHO05D000007 9.7e-15 84.3 95 38.9
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 9.7e-15 84.3 74 45.9
Ah.10g029790 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.3e-14 84.0 75 48.0
EL10Ac8g19445 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-14 83.2 108 35.2
CANSAT35G0925 Cannabis sativa HOM05D000003 ORTHO05D000007 2.8e-14 82.8 93 47.3
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 3.7e-14 82.4 89 42.7
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 6.3e-14 81.6 81 42.0
CAN.G551.108 Capsicum annuum HOM05D002280 ORTHO05D011611 6.3e-14 81.6 69 44.9
EL10Ac1g01965 Beta vulgaris HOM05D000003 ORTHO05D000007 8.2e-14 81.3 64 46.9
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 8.2e-14 81.3 70 48.6
CANSAT11G0663 Cannabis sativa HOM05D000004 ORTHO05D000034 8.2e-14 81.3 88 44.3
CANSAT01G0517 Cannabis sativa HOM05D000003 ORTHO05D000007 1.1e-13 80.9 71 45.1
EL10Ac6g13748 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-13 80.5 76 39.5
EL10Ac6g13827 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-13 80.5 77 42.9
Ah.11g040280 Amaranthus hybridus HOM05D000003 ORTHO05D011611 1.8e-13 80.1 68 45.6
Ah.03g143450 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.4e-13 79.7 67 47.8
Ah.13g067160 Amaranthus hybridus HOM05D017406 ORTHO05D000007 3.1e-13 79.3 67 50.7
Ah.10g026810 Amaranthus hybridus HOM05D000003 ORTHO05D000007 4.1e-13 79.0 79 45.6
Solyc10g075080.1 Solanum lycopersicum HOM05D015165 ORTHO05D011611 4.1e-13 79.0 66 47.0
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 6.9e-13 78.2 66 42.4
CANSAT21G1545 Cannabis sativa HOM05D000003 ORTHO05D000007 9.1e-13 77.8 62 48.4
CANSAT78G1658 Cannabis sativa HOM05D000003 ORTHO05D000007 9.1e-13 77.8 60 48.3
Hund31250 Selenicereus undatus HOM05D014118 ORTHO05D011611 9.1e-13 77.8 80 42.5
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-12 77.4 71 43.7
EL10Ac8g19738 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-12 77.0 95 36.8
CANSAT54G2645 Cannabis sativa HOM05D000003 ORTHO05D000007 2.0e-12 76.6 102 39.2
Ah.12g063330 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.6e-12 76.3 66 47.0
CAN.G265.4 Capsicum annuum HOM05D015165 ORTHO05D011611 2.6e-12 76.3 79 41.8
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 3.4e-12 75.9 65 49.2
CANSAT25G2441 Cannabis sativa HOM05D000003 ORTHO05D000007 3.4e-12 75.9 89 42.7
PGSC0003DMG400035899 Solanum tuberosum HOM05D000003 ORTHO05D000007 4.5e-12 75.5 64 43.8
EL10Ac6g14808 Beta vulgaris HOM05D000003 ORTHO05D000007 5.9e-12 75.1 72 40.3
CANSAT01G1392 Cannabis sativa HOM05D000003 ORTHO05D000004 5.9e-12 75.1 69 37.7
Sopen03g020920 Solanum pennellii HOM05D015165 ORTHO05D017089 7.7e-12 74.7 61 47.5
CANSAT01G0243 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-11 74.3 62 45.2
CANSAT25G1254 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-11 74.3 62 45.2
CANSAT25G2390 Cannabis sativa HOM05D000003 ORTHO05D011611 1.0e-11 74.3 72 41.7
Nitab4.5_0002525g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.0e-11 74.3 52 57.7
Hund23554 Selenicereus undatus HOM05D000003 ORTHO05D011611 1.0e-11 74.3 80 41.2
CANSAT11G0526 Cannabis sativa HOM05D000003 ORTHO05D000007 1.3e-11 73.9 62 45.2
CANSAT80G0090 Cannabis sativa HOM05D000003 ORTHO05D000007 1.3e-11 73.9 62 45.2
Ah.12g061560 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.7e-11 73.6 67 44.8
CANSAT11G1056 Cannabis sativa HOM05D000003 ORTHO05D000007 1.7e-11 73.6 76 42.1
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 1.7e-11 73.6 76 42.1
EL10Ac3g06704 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-11 73.2 72 41.7
EL10Ac8g19497 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-11 73.2 67 43.3
CANSAT25G1407 Cannabis sativa HOM05D000003 ORTHO05D000007 2.2e-11 73.2 72 44.4
Ah.15g097110 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.9e-11 72.8 65 47.7
CANSAT56G3933 Cannabis sativa HOM05D000003 ORTHO05D000007 2.9e-11 72.8 68 42.6
CANSAT54G2202 Cannabis sativa HOM05D000003 ORTHO05D000007 3.8e-11 72.4 62 46.8
Ah.14g080910 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.0e-11 72.0 62 43.5
CANSAT65G0002 Cannabis sativa HOM05D000003 ORTHO05D000007 6.5e-11 71.6 62 48.4
Hund10169 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-10 70.5 66 42.4
EL10Ac1g02231 Beta vulgaris HOM05D000003 ORTHO05D000007 2.5e-10 69.7 57 52.6
CANSAT54G2456 Cannabis sativa HOM05D000003 ORTHO05D000007 3.2e-10 69.3 70 41.4
Nitab4.5_0005640g0020 Nicotiana tabacum HOM05D000003 ORTHO05D011611 3.2e-10 69.3 50 56.0
Ah.04g159630 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.5e-10 68.6 62 43.5
Solyc03g078190.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 7.2e-10 68.2 61 44.3
Sopen07g022300 Solanum pennellii HOM05D000003 ORTHO05D000007 7.2e-10 68.2 52 53.8
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 9.4e-10 67.8 106 30.2
CANSAT01G1178 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-09 67.4 62 43.5
EL10Ac6g14708 Beta vulgaris HOM05D000003 ORTHO05D000007 1.6e-09 67.0 57 49.1
CANSAT54G1048 Cannabis sativa HOM05D000003 ORTHO05D000007 1.6e-09 67.0 92 32.6
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 6.1e-09 65.1 71 40.8
EL10Ac1g01519 Beta vulgaris HOM05D000003 ORTHO05D000007 8.0e-09 64.7 57 43.9
Ah.02g122310 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.4e-08 63.9 75 40.0
EL10Ac7g17161 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-08 63.9 58 44.8
EL10As3g23362 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-08 63.9 54 40.7
EL10Ac2g02962 Beta vulgaris HOM05D000003 ORTHO05D000007 5.2e-08 62.0 63 39.7
EL10Ac1g01488 Beta vulgaris HOM05D000003 ORTHO05D000007 6.7e-08 61.6 89 32.6
Peaxi162Scf00087g00091 Petunia axillaris HOM05D000003 ORTHO05D000007 8.8e-08 61.2 91 33.0
CANSAT35G1564 Cannabis sativa HOM05D000003 ORTHO05D000007 1.1e-07 60.8 67 35.8
Dinv18035 Davidia involucrata HOM05D000003 ORTHO05D000006 1.1e-07 60.8 79 39.2
CANSAT56G0142 Cannabis sativa HOM05D000003 ORTHO05D000007 1.5e-07 60.5 99 29.3
Dinv18497 Davidia involucrata HOM05D000003 ORTHO05D000007 2.6e-07 59.7 73 34.2
AUR62043420 Chenopodium quinoa HOM05D000003 ORTHO05D000007 5.7e-07 58.5 72 33.3
Hund10601 Selenicereus undatus HOM05D010531 ORTHO05D000105 9.7e-07 57.8 49 46.9
EL10Ac6g14497 Beta vulgaris HOM05D000003 ORTHO05D000007 1.7e-06 57.0 41 53.7
Dinv23885 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 57.0 63 36.5
Hund00727 Selenicereus undatus HOM05D063244 ORTHO05D011611 1.7e-06 57.0 56 32.1
Solyc10g052680.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 1.7e-06 57.0 65 36.9
Nitab4.5_0009090g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.8e-06 56.2 41 53.7
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 3.7e-06 55.8 60 41.7
CANSAT11G2544 Cannabis sativa HOM05D000003 ORTHO05D000007 4.8e-06 55.5 47 42.6
Dinv08390 Davidia involucrata HOM05D000003 ORTHO05D000007 4.8e-06 55.5 71 29.6
Dinv18316 Davidia involucrata HOM05D000003 ORTHO05D000007 4.8e-06 55.5 69 34.8
Dinv31264 Davidia involucrata HOM05D000003 ORTHO05D000007 4.8e-06 55.5 81 30.9
Lj3A1025T53 Lonicera japonica HOM05D000003 ORTHO05D000007 4.8e-06 55.5 76 34.2
PGSC0003DMG400026698 Solanum tuberosum HOM05D000003 ORTHO05D000007 6.3e-06 55.1 73 32.9
Dinv10248 Davidia involucrata HOM05D000003 ORTHO05D000007 8.2e-06 54.7 105 26.7
Dinv39840 Davidia involucrata HOM05D000003 ORTHO05D000007 8.2e-06 54.7 79 35.4
Sopen05g027740 Solanum pennellii HOM05D015165 ORTHO05D017089 8.2e-06 54.7 119 29.4


User provided reference genes

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