Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-192 675.2 327 100.0
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 3.1e-171 605.1 326 91.1
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 5.9e-146 521.2 276 93.5
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-84 314.7 172 92.4
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.2e-74 284.3 246 56.5
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 5.0e-52 209.1 263 48.3
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-51 207.6 230 47.8
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.5e-51 205.7 227 48.0
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.2e-51 205.3 227 48.0
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.4e-49 201.1 229 47.2
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.0e-49 199.9 231 47.2
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.3e-48 196.1 228 46.5
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.3e-48 196.1 228 46.5
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.3e-48 196.1 226 45.6
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.7e-48 194.9 236 44.9
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-47 194.5 238 45.8
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.7e-47 194.1 230 46.1
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 8.2e-47 191.8 232 45.7
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.6e-45 186.8 232 46.1
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.3e-44 184.5 250 42.8
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 2.9e-44 183.3 218 49.1
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 1.4e-43 181.0 238 42.9
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-41 173.3 232 41.4
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.8e-41 171.8 213 44.6
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-40 171.4 226 47.8
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-40 171.4 229 41.9
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-40 170.2 267 37.1
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 5.7e-40 169.1 239 40.2
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 8.2e-39 165.2 230 40.9
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.5e-37 161.0 230 39.6
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 8.5e-36 155.2 228 40.8
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-35 153.3 264 37.5
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 4.2e-35 152.9 226 40.7
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 4.2e-35 152.9 234 41.0
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.5e-35 152.5 229 39.3
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-34 151.4 231 38.1
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-34 151.4 275 36.4
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-34 151.0 228 41.2
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-34 151.0 229 39.3
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-34 151.0 228 40.8
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-34 151.0 228 40.8
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 3.6e-34 149.8 236 39.0
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 4.7e-34 149.4 236 40.3
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 6.1e-34 149.1 228 40.4
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.0e-33 148.3 177 46.9
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.8e-33 147.5 227 37.4
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-33 147.1 231 37.7
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-33 147.1 231 37.7
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-33 147.1 231 37.7
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.0e-33 146.7 235 37.4
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.8e-33 145.2 235 38.3
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-32 144.1 233 37.3
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-32 144.1 228 37.7
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-32 143.7 232 38.4
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-32 143.7 238 38.2
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-31 141.0 233 36.9
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-30 137.9 237 37.1
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-30 137.5 233 35.6
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.8e-30 137.5 168 45.2
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-30 137.1 230 36.1
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.1e-30 136.7 230 35.2
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 4.1e-30 136.3 243 37.4
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 4.1e-30 136.3 243 37.4
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 5.3e-30 136.0 229 37.6
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.0e-30 135.6 242 37.2
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.6e-29 134.4 232 36.6
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.6e-29 133.7 195 41.0
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.0e-28 131.7 228 36.4
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.0e-28 129.4 211 37.9
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-27 128.3 228 33.3
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.2e-27 126.7 230 35.2
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 5.5e-27 125.9 229 34.5
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-26 124.8 231 34.2
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.1e-26 122.5 147 44.9
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.0e-25 120.2 230 33.9
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 6.8e-25 119.0 226 37.6
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-24 118.2 234 35.9
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 9.8e-24 115.2 225 32.9
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.8e-24 115.2 237 31.6
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.7e-23 114.4 145 41.4
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-23 114.4 225 31.6
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-23 113.2 227 33.0
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-22 110.9 230 32.2
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-22 110.9 230 32.2
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.1e-22 109.8 203 36.5
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 9.1e-22 108.6 231 33.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 9.1e-22 108.6 138 49.3
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 7.7e-21 105.5 198 37.9
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.8e-20 103.2 203 36.0
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-19 100.9 200 36.0
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 2.5e-19 100.5 226 30.5
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 3.2e-19 100.1 146 41.8
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 5.5e-19 99.4 233 33.5
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 9.4e-19 98.6 243 30.5
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-18 98.2 185 32.4
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-18 96.7 306 25.2
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 4.7e-18 96.3 114 48.2
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.7e-18 96.3 246 30.5
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 6.1e-18 95.9 123 46.3
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.8e-17 92.4 125 42.4
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 4.4e-16 89.7 229 28.8
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 5.7e-16 89.4 225 28.4
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-16 89.4 125 41.6
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 2.8e-15 87.0 217 30.0
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 5.4e-14 82.8 139 36.0
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 5.4e-14 82.8 139 36.0
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 2.0e-13 80.9 136 39.0
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.7e-13 80.5 117 42.7
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 2.7e-13 80.5 145 36.6
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 5.9e-13 79.3 198 28.3
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.5e-11 74.7 74 47.3
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 4.2e-11 73.2 104 43.3
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.8e-10 70.5 111 35.1
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.7e-10 69.7 135 34.1
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-09 68.6 136 33.1
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-09 67.0 170 29.4
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-08 65.1 111 35.1
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 9.8e-08 62.0 110 33.6
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-07 61.2 172 27.3
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 2.9e-07 60.5 112 33.9
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.4e-06 56.2 118 32.2
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.4e-06 56.2 118 32.2


User provided reference genes

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