Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02052 Beta vulgaris HOM05D018349 ORTHO05D021568 2.6e-52 208.4 99 100.0
EL10Ac1g02051 Beta vulgaris HOM05D018349 ORTHO05D021568 1.1e-23 113.2 75 65.3
EL10Ac4g07858 Beta vulgaris HOM05D018349 ORTHO05D021568 3.1e-21 105.1 78 62.8
EL10Ac2g04690 Beta vulgaris HOM05D018349 ORTHO05D021568 3.2e-18 95.1 78 57.7
EL10Ac2g04691 Beta vulgaris HOM05D018349 ORTHO05D021568 1.6e-17 92.8 78 56.4
EL10Ac6g13476 Beta vulgaris HOM05D018349 ORTHO05D021568 2.9e-11 72.0 77 48.1
Cc02_g09620 Coffea canephora HOM05D018349 ORTHO05D011207 1.9e-10 69.3 86 41.9
Peaxi162Scf00072g01012 Petunia axillaris HOM05D001231 ORTHO05D001012 1.2e-09 66.6 78 46.2
Sopen11g002190 Solanum pennellii HOM05D001231 ORTHO05D001012 1.0e-08 63.5 77 39.0
Peaxi162Scf00120g01114 Petunia axillaris HOM05D001231 ORTHO05D001012 1.7e-08 62.8 77 40.3
CiPaw.04G178300 Carya illinoinensis HOM05D001231 ORTHO05D001012 3.0e-08 62.0 76 43.4
Potri.T011200 Populus trichocarpa HOM05D001231 ORTHO05D001012 5.1e-08 61.2 76 42.1
Potri.T011201 Populus trichocarpa HOM05D001231 ORTHO05D001012 5.1e-08 61.2 76 42.1
Potri.T011300 Populus trichocarpa HOM05D001231 ORTHO05D001012 5.1e-08 61.2 74 41.9
Potri.T011301 Populus trichocarpa HOM05D001231 ORTHO05D001012 5.1e-08 61.2 74 41.9
Solyc11g006260.2 Solanum lycopersicum HOM05D001231 ORTHO05D001012 5.1e-08 61.2 77 37.7
Nn7g38263 Nelumbo nucifera HOM05D001231 ORTHO05D001012 8.6e-08 60.5 75 38.7
Potri.004G138100 Populus trichocarpa HOM05D001231 ORTHO05D001012 1.1e-07 60.1 76 42.1
Sopen11g002870 Solanum pennellii HOM05D001231 ORTHO05D001012 1.1e-07 60.1 77 44.2
FvH4_3g14460 Fragaria vesca HOM05D020793 ORTHO05D025367 1.9e-07 59.3 76 36.8
Manes.07G074400 Manihot esculenta HOM05D001231 ORTHO05D001012 2.5e-07 58.9 76 42.1
arahy.Tifrunner.gnm1.ann1.UPL4LC Arachis hypogaea HOM05D001231 ORTHO05D001012 3.3e-07 58.5 76 42.1
Gohir.D01G023520 Gossypium hirsutum HOM05D001231 ORTHO05D001012 3.3e-07 58.5 78 37.2
Gohir.D01G023526 Gossypium hirsutum HOM05D001231 ORTHO05D001012 3.3e-07 58.5 69 42.0
Gorai.002G029700 Gossypium raimondii HOM05D001231 ORTHO05D001012 3.3e-07 58.5 69 42.0
Nitab4.5_0004431g0020 Nicotiana tabacum HOM05D001231 ORTHO05D001012 4.3e-07 58.2 74 36.5
PGSC0003DMG400032549 Solanum tuberosum HOM05D001231 ORTHO05D001012 4.3e-07 58.2 78 38.5
FAN11G1290 Fragaria x ananassa HOM05D001231 ORTHO05D001012 5.6e-07 57.8 76 40.8
FAN16G3645 Fragaria x ananassa HOM05D001231 ORTHO05D001012 5.6e-07 57.8 76 40.8
Gorai.002G029500 Gossypium raimondii HOM05D001231 ORTHO05D001012 5.6e-07 57.8 77 37.7
arahy.Tifrunner.gnm1.ann1.4H5G59 Arachis hypogaea HOM05D001231 ORTHO05D001012 7.3e-07 57.4 76 42.1
Manes.05G122400 Manihot esculenta HOM05D001231 ORTHO05D001012 7.3e-07 57.4 76 42.1
FAN21G1429 Fragaria x ananassa HOM05D020793 ORTHO05D025367 9.5e-07 57.0 73 35.6
MSTRG.2131 Avicennia marina HOM05D001231 ORTHO05D001012 1.6e-06 56.2 82 39.0
Cfa002248 Carpinus fangiana HOM05D001231 ORTHO05D001012 1.6e-06 56.2 76 43.4
Nn7g38191 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.6e-06 56.2 75 38.7
TWI79G1670 Tripterygium wilfordii HOM05D001231 ORTHO05D001012 1.6e-06 56.2 76 40.8
Actinidia39325 Actinidia chinensis HOM05D001231 ORTHO05D001012 2.1e-06 55.8 75 38.7
CAN.G976.1 Capsicum annuum HOM05D001231 ORTHO05D001012 2.1e-06 55.8 72 40.3
Nn7g38190 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.1e-06 55.8 76 42.1
Nitab4.5_0000374g0050 Nicotiana tabacum HOM05D001231 ORTHO05D001012 2.1e-06 55.8 72 41.7
RcHm_v2.0_Chr5g0024081 Rosa chinensis HOM05D001231 ORTHO05D001012 2.1e-06 55.8 75 37.3
Prupe.7G071000 Prunus persica HOM05D001231 ORTHO05D001012 2.8e-06 55.5 82 34.1
Zm00001eb304240 Zea mays HOM05D001231 ORTHO05D001012 2.8e-06 55.5 76 40.8
CAN.G976.2 Capsicum annuum HOM05D001231 ORTHO05D001012 3.6e-06 55.1 74 39.2
Ciclev10026887m.g Citrus clementina HOM05D001231 ORTHO05D001012 3.6e-06 55.1 74 39.2
COL.COLO4_16172 Corchorus olitorius HOM05D001231 ORTHO05D001012 3.6e-06 55.1 76 38.2
FvH4_3g14600 Fragaria vesca HOM05D001231 ORTHO05D001012 3.6e-06 55.1 76 38.2
Prupe.7G071100 Prunus persica HOM05D001231 ORTHO05D001012 3.6e-06 55.1 83 36.1
Prupe.7G071200 Prunus persica HOM05D001231 ORTHO05D001012 3.6e-06 55.1 83 36.1
Prupe.7G071300 Prunus persica HOM05D001231 ORTHO05D001012 3.6e-06 55.1 83 36.1
Lalb_Chr12g0202761 Lupinus albus HOM05D001231 ORTHO05D001012 4.7e-06 54.7 77 37.7
THA.LOC104818404 Tarenaya hassleriana HOM05D001231 ORTHO05D001012 4.7e-06 54.7 76 42.1
EL10Ac7g17637 Beta vulgaris HOM05D001231 ORTHO05D001012 6.2e-06 54.3 75 40.0
Prupe.4G131400 Prunus persica HOM05D001231 ORTHO05D001012 6.2e-06 54.3 75 37.3
Sc20g0000730 Simmondsia chinensis HOM05D001231 ORTHO05D001012 6.2e-06 54.3 76 36.8
Carub.0004s1326 Capsella rubella HOM05D001231 ORTHO05D001012 8.1e-06 53.9 68 35.3


User provided reference genes

Program Settings