Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02043 Beta vulgaris HOM05D002637 ORTHO05D009046 5.6e-116 421.0 219 100.0
EL10Ac7g17414 Beta vulgaris HOM05D000868 ORTHO05D000711 1.2e-49 200.7 115 94.8
EL10Ac8g18960 Beta vulgaris HOM05D000903 ORTHO05D000731 1.5e-41 173.7 96 95.8
AUR62025333 Chenopodium quinoa HOM05D000903 ORTHO05D000731 2.9e-32 142.9 96 78.1
AUR62028328 Chenopodium quinoa HOM05D000903 ORTHO05D000731 2.9e-32 142.9 96 78.1
Ah.09g228880 Amaranthus hybridus HOM05D000903 ORTHO05D000731 2.7e-30 136.3 96 75.0
Hund08906 Selenicereus undatus HOM05D000903 ORTHO05D000731 1.1e-26 124.4 95 69.5
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 5.9e-25 118.6 100 63.0
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 1.7e-16 90.5 83 56.6
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 9.5e-15 84.7 82 48.8
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.1e-14 83.6 82 48.8
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 1.0e-13 81.3 58 63.8
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.8e-13 80.5 82 46.3
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 2.3e-13 80.1 122 40.2
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 2.3e-13 80.1 67 52.2
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 3.0e-13 79.7 84 47.6
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 4.0e-13 79.3 78 51.3
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 4.0e-13 79.3 114 41.2
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 6.8e-13 78.6 109 45.0
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 6.8e-13 78.6 80 43.8
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 8.8e-13 78.2 113 41.6
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 1.5e-12 77.4 61 55.7
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 2.0e-12 77.0 110 40.9
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 2.0e-12 77.0 83 44.6
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 3.4e-12 76.3 61 54.1
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 3.4e-12 76.3 61 54.1
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 3.4e-12 76.3 61 54.1
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 3.4e-12 76.3 61 54.1
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 4.4e-12 75.9 82 42.7
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 4.4e-12 75.9 84 41.7
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 7.5e-12 75.1 109 41.3
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 7.5e-12 75.1 61 50.8
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 9.8e-12 74.7 59 55.9
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 9.8e-12 74.7 123 38.2
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 9.8e-12 74.7 84 41.7
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 9.8e-12 74.7 58 56.9
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 9.8e-12 74.7 112 41.1
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 1.7e-11 73.9 84 40.5
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 1.7e-11 73.9 86 41.9
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 2.8e-11 73.2 60 55.0
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.8e-11 73.2 59 54.2
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 3.7e-11 72.8 61 50.8
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 3.7e-11 72.8 61 52.5
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 4.9e-11 72.4 110 37.3
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 4.9e-11 72.4 109 41.3
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 4.9e-11 72.4 60 51.7
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 4.9e-11 72.4 54 64.8
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 6.3e-11 72.0 119 39.5
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 6.3e-11 72.0 107 37.4
Nn6g35723 Nelumbo nucifera HOM05D000903 ORTHO05D000731 8.3e-11 71.6 96 49.0
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 1.8e-10 70.5 119 37.0
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 1.8e-10 70.5 117 39.3
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 2.4e-10 70.1 56 58.9
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 2.4e-10 70.1 103 36.9
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 4.1e-10 69.3 59 55.9
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 4.1e-10 69.3 54 53.7
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 5.4e-10 68.9 112 35.7
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 7.0e-10 68.6 86 41.9
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 7.0e-10 68.6 75 46.7
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 1.2e-09 67.8 86 44.2
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.2e-09 67.8 61 52.5
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 1.6e-09 67.4 75 38.7
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 1.6e-09 67.4 77 39.0
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 2.0e-09 67.0 111 36.0
RcHm_v2.0_Chr2g0096101 Rosa chinensis HOM05D000903 ORTHO05D000731 2.0e-09 67.0 95 48.4
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 2.7e-09 66.6 78 38.5
Nn8g38523 Nelumbo nucifera HOM05D000903 ORTHO05D000731 2.7e-09 66.6 97 48.5
GSVIVG01015004001 Vitis vinifera HOM05D000903 ORTHO05D000731 2.7e-09 66.6 99 47.5
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 3.5e-09 66.2 53 56.6
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 3.5e-09 66.2 112 35.7
Aqoxy7G04177 Aquilegia oxysepala HOM05D000903 ORTHO05D000731 4.5e-09 65.9 96 46.9
Sc14g0000900 Simmondsia chinensis HOM05D000903 ORTHO05D000731 4.5e-09 65.9 91 47.3
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 5.9e-09 65.5 50 58.0
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 5.9e-09 65.5 77 39.0
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 5.9e-09 65.5 59 49.2
Gorai.010G095400 Gossypium raimondii HOM05D000903 ORTHO05D000731 7.8e-09 65.1 100 47.0
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 1.0e-08 64.7 79 40.5
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 1.7e-08 63.9 60 48.3
Gohir.D06G082000 Gossypium hirsutum HOM05D000903 ORTHO05D000731 2.3e-08 63.5 95 47.4
MD02G1103900 Malus domestica HOM05D000903 ORTHO05D000731 2.3e-08 63.5 94 43.6
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 2.3e-08 63.5 141 33.3
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 2.9e-08 63.2 111 36.0
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 5.0e-08 62.4 84 40.5
COL.COLO4_21197 Corchorus olitorius HOM05D000903 ORTHO05D000731 6.6e-08 62.0 95 41.1
Duzib168G0371 Durio zibethinus HOM05D000903 ORTHO05D000731 6.6e-08 62.0 95 43.2
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 6.6e-08 62.0 65 43.1
Haze_26076 Corylus avellana HOM05D000903 ORTHO05D000731 8.6e-08 61.6 101 43.6
FvH4_1g09530 Fragaria vesca HOM05D000903 ORTHO05D000731 8.6e-08 61.6 96 45.8
FAN19G2819 Fragaria x ananassa HOM05D000903 ORTHO05D000731 8.6e-08 61.6 96 45.8
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 8.6e-08 61.6 48 54.2
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.1e-07 61.2 79 34.2
Gohir.A06G084200 Gossypium hirsutum HOM05D000903 ORTHO05D000731 1.1e-07 61.2 92 46.7
FAN26G2089 Fragaria x ananassa HOM05D000903 ORTHO05D000731 1.5e-07 60.8 95 45.3
Atru.chr7.1781 Acer truncatum HOM05D000903 ORTHO05D000731 1.9e-07 60.5 98 43.9
Cfa002933 Carpinus fangiana HOM05D000903 ORTHO05D000731 1.9e-07 60.5 101 43.6
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 1.9e-07 60.5 86 34.9
FAN23G1986 Fragaria x ananassa HOM05D000903 ORTHO05D000731 2.5e-07 60.1 95 45.3
FAN28G0944 Fragaria x ananassa HOM05D000903 ORTHO05D000731 2.5e-07 60.1 95 45.3
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 2.5e-07 60.1 45 55.6
Thecc.09G069300 Theobroma cacao HOM05D000903 ORTHO05D000731 2.5e-07 60.1 101 42.6
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 3.3e-07 59.7 57 42.1
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 4.3e-07 59.3 54 44.4
Sc18g0002870 Simmondsia chinensis HOM05D000903 ORTHO05D000731 4.3e-07 59.3 94 42.6
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.2e-06 57.8 79 32.9
FAN26G0756 Fragaria x ananassa HOM05D000903 ORTHO05D000731 2.1e-06 57.0 95 44.2
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 2.1e-06 57.0 53 49.1
MD15G1224300 Malus domestica HOM05D000903 ORTHO05D000731 4.7e-06 55.8 94 40.4
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 6.1e-06 55.5 78 30.8
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 6.1e-06 55.5 53 47.2
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 8.0e-06 55.1 74 39.2
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 8.0e-06 55.1 74 39.2
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 8.0e-06 55.1 80 38.8
Ciclev10027324m.g Citrus clementina HOM05D000903 ORTHO05D000731 8.0e-06 55.1 90 41.1


User provided reference genes

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