Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 1.7e-126 456.1 236 100.0
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 3.9e-91 338.6 221 73.3
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 3.3e-74 282.3 163 84.7
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 4.0e-59 232.3 228 55.7
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 1.5e-58 230.3 225 56.0
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 1.5e-58 230.3 225 56.9
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 7.5e-58 228.0 224 55.8
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 2.2e-57 226.5 225 54.2
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 6.3e-57 224.9 229 53.7
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 8.2e-57 224.6 232 53.0
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.1e-56 224.2 235 54.0
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 2.4e-56 223.0 233 50.2
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 5.3e-56 221.9 226 51.3
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 2.6e-55 219.5 224 52.2
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 2.6e-55 219.5 232 52.2
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 3.5e-55 219.2 229 50.7
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.0e-54 217.6 217 52.5
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 1.7e-54 216.9 229 51.5
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.7e-54 216.9 226 52.7
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 5.0e-54 215.3 229 52.8
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 5.0e-54 215.3 230 51.7
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 6.5e-54 214.9 223 48.4
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 8.5e-54 214.5 224 51.8
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 1.1e-53 214.2 240 46.7
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 3.2e-53 212.6 226 49.6
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 5.5e-53 211.8 218 52.8
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 2.1e-52 209.9 234 49.1
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 4.7e-52 208.8 202 55.4
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 4.7e-52 208.8 230 50.9
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 1.0e-51 207.6 231 47.2
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 1.4e-51 207.2 205 55.6
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 1.4e-51 207.2 228 48.7
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 3.0e-51 206.1 225 51.6
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 3.0e-51 206.1 229 51.1
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 5.2e-51 205.3 214 51.4
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 3.4e-50 202.6 227 48.9
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 5.7e-50 201.8 234 48.7
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 7.5e-50 201.4 227 49.3
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 2.8e-49 199.5 225 49.8
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 8.3e-49 198.0 225 50.7
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 8.3e-49 198.0 201 52.7
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 8.3e-49 198.0 233 44.6
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 2.4e-48 196.4 227 49.3
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 5.4e-48 195.3 228 46.5
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 9.1e-48 194.5 225 48.4
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 1.2e-47 194.1 238 42.9
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 2.0e-47 193.4 226 48.7
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 2.0e-47 193.4 239 44.8
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 3.5e-47 192.6 165 60.0
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 4.5e-47 192.2 225 49.3
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 1.5e-45 187.2 202 53.0
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 5.5e-45 185.3 212 48.6
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 5.5e-45 185.3 227 47.6
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 2.1e-44 183.3 227 48.0
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 4.4e-42 175.6 234 45.3
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 6.3e-41 171.8 176 55.1
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 1.8e-40 170.2 210 43.8
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 5.4e-40 168.7 195 50.8
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.6e-39 167.2 175 50.3
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.6e-39 167.2 175 50.3
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 2.7e-39 166.4 202 48.0
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 1.3e-38 164.1 210 41.4
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.5e-37 160.6 203 44.8
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 2.5e-37 159.8 154 50.0
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 4.3e-37 159.1 228 43.0
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.6e-36 157.1 103 75.7
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 1.0e-35 154.5 206 43.2
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 5.2e-35 152.1 91 79.1
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 3.9e-30 136.0 235 39.6
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 1.1e-29 134.4 133 54.1
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 3.3e-29 132.9 225 39.6
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 2.8e-28 129.8 141 54.6
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 8.9e-27 124.8 138 49.3
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.5e-26 124.0 116 54.3
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 2.6e-26 123.2 132 47.7
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 5.8e-26 122.1 83 73.5
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 5.8e-26 122.1 115 51.3
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.9e-25 119.8 117 53.0
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.9e-25 119.8 117 53.0
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 9.2e-24 114.8 120 55.0
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 1.2e-23 114.4 153 41.8
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 1.0e-22 111.3 141 43.3
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 3.9e-22 109.4 137 42.3
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 8.6e-22 108.2 120 52.5
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.2e-20 104.4 109 51.4
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 3.6e-20 102.8 146 43.2
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 3.6e-20 102.8 118 48.3
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 4.7e-20 102.4 109 47.7
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 1.1e-19 101.3 119 42.9
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.8e-19 98.6 137 40.9
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 6.8e-19 98.6 102 51.0
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 5.8e-18 95.5 122 47.5
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 5.8e-18 95.5 144 37.5
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 1.3e-17 94.4 132 42.4
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 1.3e-17 94.4 185 34.6
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 5.4e-16 89.0 90 51.1
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 9.2e-16 88.2 225 25.8
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 2.3e-14 83.6 103 40.8
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 6.6e-14 82.0 69 56.5
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 2.5e-13 80.1 71 54.9
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.7e-12 75.9 66 51.5
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 3.1e-11 73.2 70 54.3
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 6.4e-09 65.5 77 49.4


User provided reference genes

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