Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01938 Beta vulgaris HOM05D002553 ORTHO05D038995 2.0e-113 412.5 220 100.0
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 2.3e-08 63.5 29 100.0
VMungo1080G0516 Vigna mungo HOM05D002553 ORTHO05D002767 2.3e-08 63.5 41 65.9
AUR62000869 Chenopodium quinoa HOM05D002553 ORTHO05D002767 5.0e-08 62.4 29 96.6
Ah.06g190110 Amaranthus hybridus HOM05D002553 ORTHO05D002767 6.6e-08 62.0 29 93.1
arahy.Tifrunner.gnm1.ann1.0VD1AP Arachis hypogaea HOM05D002553 ORTHO05D002767 6.6e-08 62.0 29 93.1
arahy.Tifrunner.gnm1.ann1.7PL8A0 Arachis hypogaea HOM05D002553 ORTHO05D002767 6.6e-08 62.0 29 93.1
Sc09g0003340 Simmondsia chinensis HOM05D002553 ORTHO05D002767 6.6e-08 62.0 29 93.1
Hund07047 Selenicereus undatus HOM05D002553 ORTHO05D002767 8.6e-08 61.6 29 89.7
arahy.Tifrunner.gnm1.ann1.FC6WKF Arachis hypogaea HOM05D002553 ORTHO05D002767 1.5e-07 60.8 29 93.1
arahy.Tifrunner.gnm1.ann1.T73DMJ Arachis hypogaea HOM05D002553 ORTHO05D002767 1.5e-07 60.8 29 93.1
Glyma.03G240100 Glycine max HOM05D002553 ORTHO05D002767 1.5e-07 60.8 29 89.7
Phvul.006G093911 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 1.5e-07 60.8 29 89.7
VMungo0540G1597 Vigna mungo HOM05D002553 ORTHO05D002767 1.5e-07 60.8 29 89.7
arahy.Tifrunner.gnm1.ann1.EXNL9P Arachis hypogaea HOM05D002553 ORTHO05D002767 1.9e-07 60.5 43 62.8
CSS0016581 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
CSS0026671 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
ECA247G0575 Erigeron canadensis HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
FvH4_6g05350 Fragaria vesca HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
FAN09G0499 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
FAN14G5684 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
Hma1.2p1_0666F.1_g199470 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
Lsat_1_v5_gn_1_25020 Lactuca sativa HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
Lj9C682T7 Lonicera japonica HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
RcHm_v2.0_Chr3g0454121 Rosa chinensis HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 1.9e-07 60.5 29 89.7
AUR62005107 Chenopodium quinoa HOM05D002553 ORTHO05D002767 2.5e-07 60.1 29 93.1
Psat6g149240 Pisum sativum HOM05D002553 ORTHO05D002767 3.3e-07 59.7 29 89.7
SalBow5G4087 Salvia bowleyana HOM05D002553 ORTHO05D002767 3.3e-07 59.7 29 86.2
DCAR_003314 Daucus carota HOM05D002553 ORTHO05D002767 4.3e-07 59.3 29 86.2
CAN.G1134.23 Capsicum annuum HOM05D002553 ORTHO05D002767 5.6e-07 58.9 29 89.7
Lalb_Chr18g0045531 Lupinus albus HOM05D002553 ORTHO05D002767 5.6e-07 58.9 29 86.2
PSO210G1325 Papaver somniferum HOM05D002553 ORTHO05D002767 5.6e-07 58.9 29 89.7
Rhsim05G0144300 Rhododendron simsii HOM05D002553 ORTHO05D002767 5.6e-07 58.9 29 86.2
Ca_10093_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
Migut.B01190 Erythranthe guttata HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
Lj5g0009152 Lotus japonicus HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
MD04G1209000 Malus domestica HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
Prupe.6G330000 Prunus persica HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
PGR083G1620 Punica granatum HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
TPR.G3095 Trifolium pratense HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
TWI12G0069 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 7.3e-07 58.5 29 86.2
Carub.0006s2513 Capsella rubella HOM05D002553 ORTHO05D002767 9.5e-07 58.2 29 89.7
CARHR079530 Cardamine hirsuta HOM05D002553 ORTHO05D002767 9.5e-07 58.2 29 89.7
Nitab4.5_0004271g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 9.5e-07 58.2 29 86.2
Nitab4.5_0006809g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 9.5e-07 58.2 29 86.2
Peaxi162Scf00434g00216 Petunia axillaris HOM05D002553 ORTHO05D002767 9.5e-07 58.2 29 86.2
SGA_v2.0_scaffold232G43477 Striga asiatica HOM05D002553 ORTHO05D002767 9.5e-07 58.2 41 58.5
TPR.G2739 Trifolium pratense HOM05D002553 ORTHO05D002767 9.5e-07 58.2 29 86.2
Aqoxy5G00545 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
Dinv22901 Davidia involucrata HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
Dinv23976 Davidia involucrata HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
HanXRQChr02g0037091 Helianthus annuus HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
Nn4g26152 Nelumbo nucifera HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
Solyc01g098700.4 Solanum lycopersicum HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
Sopen01g042240 Solanum pennellii HOM05D002553 ORTHO05D002767 1.2e-06 57.8 29 86.2
ATR0626G263 Amborella trichopoda HOM05D002553 ORTHO05D002767 1.6e-06 57.4 29 82.8
CANSAT54G1986 Cannabis sativa HOM05D002553 ORTHO05D002767 1.6e-06 57.4 29 86.2
Glyma.10G156701 Glycine max HOM05D002553 ORTHO05D002767 1.6e-06 57.4 29 86.2
Oeu012095.1 Olea europaea HOM05D002553 ORTHO05D002767 1.6e-06 57.4 29 82.8
SGA_v2.0_scaffold43G16279 Striga asiatica HOM05D002553 ORTHO05D002767 1.6e-06 57.4 29 82.8
TPR.G3067 Trifolium pratense HOM05D002553 ORTHO05D038995 1.6e-06 57.4 36 66.7
Aa31LG5G15560 Aethionema arabicum HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
AL3G15610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
AL6G39600 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
AT3G05190 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
BcaNung02463 Brassica carinata HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
BcaNung04368 Brassica carinata HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
BNapus_Darmor_BZH_scaffold_114p00250 Brassica napus HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
BraSC132t45517Z Brassica rapa HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
Carub.0003s0444 Capsella rubella HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
CARHR186010 Cardamine hirsuta HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
MELO3C004297.2 Cucumis melo HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 82.8
CsaV3_2G004990 Cucumis sativus L. HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 82.8
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
Thhalv10020427m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
Mapoly0006s0260 Marchantia polymorpha HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 82.8
Sp3g04040 Schrenkiella parvula HOM05D002553 ORTHO05D002767 2.1e-06 57.0 29 86.2
CiPaw.07G014800 Carya illinoinensis HOM05D002553 ORTHO05D002767 2.8e-06 56.6 29 82.8
Pp3c16_17790 Physcomitrium patens HOM05D002553 ORTHO05D002767 2.8e-06 56.6 29 82.8
Potri.005G039100 Populus trichocarpa HOM05D002553 ORTHO05D002767 2.8e-06 56.6 29 86.2
Sabra05G0037500 Salix brachista HOM05D002553 ORTHO05D002767 2.8e-06 56.6 29 86.2
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 2.8e-06 56.6 29 82.8
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 3.6e-06 56.2 29 82.8
COL.COLO4_13515 Corchorus olitorius HOM05D002553 ORTHO05D002767 3.6e-06 56.2 29 82.8
Haze_04233 Corylus avellana HOM05D002553 ORTHO05D002767 3.6e-06 56.2 29 82.8
Migut.N01859 Erythranthe guttata HOM05D002553 ORTHO05D002767 3.6e-06 56.2 29 82.8
Eucgr.B02001 Eucalyptus grandis HOM05D002553 ORTHO05D002767 3.6e-06 56.2 29 82.8
Medtr1g082470 Medicago truncatula HOM05D002553 ORTHO05D002767 3.6e-06 56.2 28 85.7
Medtr1g083370 Medicago truncatula HOM05D002553 ORTHO05D002767 3.6e-06 56.2 29 82.8
QL03p004498 Quercus lobata HOM05D002553 ORTHO05D002767 3.6e-06 56.2 29 82.8
Atru.chr2.475 Acer truncatum HOM05D002553 ORTHO05D002767 4.7e-06 55.8 29 82.8
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 4.7e-06 55.8 29 79.3
THA.LOC104802808 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 4.7e-06 55.8 29 82.8
Zm00001eb017520 Zea mays HOM05D002553 ORTHO05D002767 4.7e-06 55.8 29 82.8
BcaC04g23681 Brassica carinata HOM05D002553 ORTHO05D002767 6.2e-06 55.5 28 85.7
A09p05260 Brassica napus HOM05D002553 ORTHO05D002767 6.2e-06 55.5 28 85.7
C09p05740 Brassica napus HOM05D002553 ORTHO05D002767 6.2e-06 55.5 28 85.7
BolC9t53501H Brassica oleracea HOM05D002553 ORTHO05D002767 6.2e-06 55.5 28 85.7
BraA09t36165Z Brassica rapa HOM05D002553 ORTHO05D002767 6.2e-06 55.5 28 85.7
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 6.2e-06 55.5 29 86.2
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 6.2e-06 55.5 29 86.2
Cc02_g32710 Coffea canephora HOM05D002553 ORTHO05D002767 6.2e-06 55.5 29 82.8
AagrBONN_evm.TU.Sc2ySwM_344.2814 Anthoceros agrestis HOM05D002553 ORTHO05D002767 8.1e-06 55.1 29 82.8
HPP92_001339 Vanilla planifolia HOM05D002553 ORTHO05D002767 8.1e-06 55.1 29 82.8
HPP92_001400 Vanilla planifolia HOM05D002553 ORTHO05D002767 8.1e-06 55.1 29 82.8


User provided reference genes

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