Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 1.0e-207 726.5 367 100.0
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 4.2e-132 475.3 339 74.0
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 2.4e-127 459.5 379 66.2
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 7.6e-126 454.5 379 64.9
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 6.7e-122 441.4 381 64.3
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.2e-99 367.5 405 50.9
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.1e-99 366.7 384 53.4
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 2.1e-99 366.7 377 54.6
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 2.7e-99 366.3 367 55.9
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.4e-98 364.0 331 59.2
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.5e-97 360.5 382 53.4
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 2.6e-97 359.8 377 52.0
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 9.7e-97 357.8 386 51.3
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.3e-96 357.5 375 54.1
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 1.3e-96 357.5 390 52.6
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.8e-96 356.3 350 55.4
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.8e-96 355.5 373 53.9
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 8.2e-96 354.8 333 57.7
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.8e-95 353.6 386 53.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 5.3e-95 352.1 370 53.8
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 6.9e-95 351.7 362 53.9
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 9.1e-95 351.3 370 53.0
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.2e-94 350.9 386 50.0
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.5e-94 350.5 280 63.9
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.6e-94 349.7 292 62.0
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 4.5e-94 349.0 353 55.0
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 4.5e-94 349.0 366 53.3
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 2.2e-93 346.7 312 58.7
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 6.5e-93 345.1 385 51.9
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.9e-92 343.6 357 52.9
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 2.7e-91 339.7 376 51.1
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.3e-90 336.7 389 51.2
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 2.3e-90 336.7 282 62.4
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.3e-90 336.7 278 61.9
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 2.3e-90 336.7 263 64.6
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.0e-90 336.3 323 55.7
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 8.8e-90 334.7 292 58.2
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 8.8e-90 334.7 292 58.2
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.6e-89 333.2 292 57.9
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 3.3e-89 332.8 261 64.0
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 3.3e-89 332.8 278 61.2
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 5.7e-89 332.0 306 58.8
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.3e-88 330.9 361 52.1
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.7e-88 330.5 362 50.8
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 2.8e-88 329.7 338 54.7
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 6.3e-88 328.6 375 49.6
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 8.2e-88 328.2 379 50.4
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.4e-87 327.4 240 67.9
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.8e-87 327.0 335 52.5
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 4.1e-87 325.9 311 56.3
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 1.6e-86 323.9 361 50.4
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 2.6e-86 323.2 287 57.8
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 3.8e-85 319.3 274 60.2
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 3.8e-85 319.3 327 53.8
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 6.5e-85 318.5 375 49.1
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 1.1e-84 317.8 377 51.2
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.5e-84 317.4 373 51.2
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.9e-84 317.0 348 50.6
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 2.5e-84 316.6 333 52.3
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 2.5e-84 316.6 299 56.9
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.5e-84 316.6 366 49.5
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 2.5e-84 316.6 370 48.4
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 5.5e-84 315.5 289 57.4
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 7.2e-84 315.1 413 46.2
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 9.4e-84 314.7 366 49.5
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.6e-83 313.9 345 51.0
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 2.7e-83 313.2 287 56.8
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 2.3e-82 310.1 288 57.6
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 3.0e-82 309.7 363 48.5
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 6.7e-82 308.5 326 51.8
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 6.7e-82 308.5 377 47.2
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 6.7e-82 308.5 256 60.9
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 8.8e-82 308.1 366 48.6
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.5e-81 307.4 308 54.2
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 2.0e-81 307.0 352 48.9
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.0e-81 307.0 323 53.3
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 3.3e-81 306.2 297 55.9
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 4.4e-81 305.8 374 47.6
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 7.5e-81 305.1 285 57.2
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 9.7e-81 304.7 359 50.7
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 9.7e-81 304.7 284 57.0
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 9.7e-81 304.7 258 60.5
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 9.7e-81 304.7 268 59.3
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.3e-80 304.3 199 75.4
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.7e-80 303.9 286 57.0
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.7e-80 303.9 330 51.5
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 2.8e-80 303.1 404 46.5
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 3.7e-80 302.8 376 47.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.3e-80 302.0 381 47.0
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 8.2e-80 301.6 264 59.1
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.4e-79 300.8 316 52.8
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.4e-79 300.8 313 53.4
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 2.4e-79 300.1 322 51.6
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 2.4e-79 300.1 322 51.6
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 5.3e-79 298.9 256 60.9
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 5.9e-78 295.4 323 51.4
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.2e-77 293.5 291 56.0
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.5e-76 290.8 242 61.6
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 2.5e-76 290.0 274 54.4
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 4.2e-76 289.3 373 46.4
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 4.7e-75 285.8 213 66.7
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 6.3e-72 275.4 211 65.4
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 9.1e-71 271.6 273 52.0
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 2.7e-70 270.0 255 54.9
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 9.5e-68 261.5 229 61.1
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 3.0e-66 256.5 222 58.6
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 5.2e-66 255.8 237 54.4
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.5e-65 254.2 201 61.2
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 5.7e-65 252.3 247 53.4
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 9.2e-63 245.0 245 50.6
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.3e-61 241.1 148 79.1
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.3e-53 214.5 234 53.4
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 1.1e-52 211.5 190 56.3
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 3.6e-51 206.5 173 59.0
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 4.7e-51 206.1 121 80.2
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 8.9e-50 201.8 182 57.1
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 4.4e-49 199.5 193 53.4
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.4e-47 194.5 103 86.4
EL10Ac5g10765 Beta vulgaris HOM05D001787 ORTHO05D088741 1.6e-35 154.5 90 84.4
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 3.0e-29 133.7 69 85.5
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 8.7e-29 132.1 79 73.4
EL10Ac7g16970 Beta vulgaris HOM05D000810 ORTHO05D014916 7.3e-28 129.0 107 67.3
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 2.0e-17 94.4 199 34.2
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 3.0e-13 80.5 61 60.7
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 4.9e-08 63.2 41 73.2
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 8.4e-08 62.4 166 28.3
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 1.2e-06 58.5 166 27.1


User provided reference genes

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