Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 8.2e-51 203.4 98 100.0
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 9.7e-44 179.9 96 85.4
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 3.6e-38 161.4 97 80.4
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 3.6e-38 161.4 97 80.4
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.0e-37 159.8 97 76.3
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.0e-37 159.8 97 78.4
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.8e-37 159.1 97 78.4
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.8e-37 159.1 97 77.3
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.8e-37 159.1 97 78.4
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.3e-37 158.7 95 78.9
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.9e-37 157.9 97 77.3
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 3.9e-37 157.9 97 75.3
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 6.7e-37 157.1 95 76.8
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 6.7e-37 157.1 95 77.9
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 8.8e-37 156.8 97 75.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 1.1e-36 156.4 97 78.4
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 75.3
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.5e-36 156.0 92 80.4
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.0e-36 155.6 90 80.0
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.5e-36 155.2 97 75.3
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 74.2
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 76.3
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 4.3e-36 154.5 95 75.8
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 7.4e-36 153.7 97 75.3
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.3e-35 152.9 97 75.3
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 2.8e-35 151.8 98 75.5
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.8e-35 151.8 90 77.8
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 4.8e-35 151.0 97 73.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 4.8e-35 151.0 92 78.3
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.1e-34 149.8 98 75.5
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.1e-34 149.8 97 73.2
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.1e-34 149.8 97 72.2
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 98 72.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.8e-34 149.1 98 73.5
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 2.4e-34 148.7 95 75.8
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 71.1
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 71.1
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.1e-34 148.3 90 77.8
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.1e-34 148.3 90 77.8
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 3.1e-34 148.3 90 77.8
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 4.1e-34 147.9 85 78.8
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 5.3e-34 147.5 92 75.0
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 5.3e-34 147.5 97 73.2
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 5.3e-34 147.5 99 71.7
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 5.3e-34 147.5 93 75.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 6.9e-34 147.1 93 73.1
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 6.9e-34 147.1 96 69.8
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 6.9e-34 147.1 97 71.1
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 9.1e-34 146.7 99 71.7
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 9.1e-34 146.7 99 71.7
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 9.1e-34 146.7 99 71.7
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 9.1e-34 146.7 98 67.3
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 2.6e-33 145.2 90 76.7
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 4.5e-33 144.4 87 77.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 7.7e-33 143.7 94 72.3
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.7e-33 143.7 99 70.7
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.3e-32 142.9 97 68.0
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.3e-32 142.9 91 72.5
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.7e-32 142.5 93 75.3
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 2.2e-32 142.1 91 73.6
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.9e-32 141.7 92 76.1
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 3.8e-32 141.4 92 73.9
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 6.5e-32 140.6 92 72.8
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 6.5e-32 140.6 94 70.2
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.1e-31 139.8 95 70.5
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.4e-31 139.4 96 67.7
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 1.4e-31 139.4 100 66.0
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 2.5e-31 138.7 97 68.0
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 4.2e-31 137.9 92 70.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 5.5e-31 137.5 98 66.3
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 5.5e-31 137.5 124 59.7
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.2e-30 136.3 81 79.0
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.1e-30 135.6 92 69.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.7e-30 135.2 97 68.0
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 3.6e-30 134.8 97 63.9
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 3.6e-30 134.8 97 63.9
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 3.6e-30 134.8 97 63.9
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 3.6e-30 134.8 97 63.9
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 4.7e-30 134.4 96 66.7
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 6.1e-30 134.0 91 73.6
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 7.9e-30 133.7 97 62.9
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 7.9e-30 133.7 97 69.1
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-29 132.9 92 66.3
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-29 132.9 91 68.1
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 1.8e-29 132.5 97 67.0
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.3e-29 132.1 92 66.3
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 3.0e-29 131.7 91 68.1
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 3.0e-29 131.7 83 74.7
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 3.9e-29 131.3 92 67.4
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 3.9e-29 131.3 92 66.3
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-29 131.0 91 68.1
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 5.1e-29 131.0 97 68.0
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 6.7e-29 130.6 91 67.0
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.5e-28 129.4 91 67.0
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.5e-28 129.4 91 67.0
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 3.3e-28 128.3 81 74.1
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 4.4e-28 127.9 102 62.7
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.7e-27 125.9 83 75.9
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 3.7e-27 124.8 81 71.6
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 3.7e-27 124.8 72 80.6
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 4.8e-27 124.4 77 75.3
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.8e-26 122.5 93 63.4
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 1.5e-25 119.4 85 64.7
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 2.2e-24 115.5 82 68.3
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.9e-23 112.5 63 84.1
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.0e-21 106.7 94 59.6
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 4.8e-19 97.8 79 57.0
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 8.2e-19 97.1 73 64.4
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 5.3e-18 94.4 88 56.8
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 2.0e-17 92.4 87 56.3
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.6e-14 82.8 96 51.0
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 6.8e-13 77.4 41 87.8
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.2e-12 76.6 113 43.4
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.6e-12 75.5 87 50.6
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.7e-11 72.8 60 61.7
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.2e-11 72.4 44 70.5
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 1.6e-09 66.2 78 43.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.3e-08 63.2 37 70.3
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 7.2e-07 57.4 46 56.5


User provided reference genes

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