Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 5.1e-251 870.5 423 100.0
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.9e-176 622.9 430 72.3
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 6.6e-174 614.4 424 72.4
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 3.6e-172 608.6 441 69.4
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 7.4e-149 531.2 399 63.4
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 3.1e-147 525.8 402 64.2
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 6.9e-147 524.6 400 63.8
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 9.0e-147 524.2 401 62.8
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.0e-145 520.8 402 62.2
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.3e-145 520.4 361 67.0
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 8.4e-145 517.7 400 63.2
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.1e-144 517.3 402 62.2
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.5e-144 516.2 399 62.4
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.2e-144 515.8 422 60.7
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 7.1e-144 514.6 409 61.9
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.2e-143 513.8 408 60.8
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 2.7e-143 512.7 406 61.1
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.7e-143 512.7 398 62.1
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.5e-143 512.3 401 62.3
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.6e-143 511.9 396 62.6
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 3.0e-142 509.2 396 62.4
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 3.0e-142 509.2 420 59.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.9e-142 508.8 400 62.2
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.1e-141 507.3 399 61.7
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.9e-141 506.5 396 62.9
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 5.7e-141 505.0 404 61.4
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 7.4e-141 504.6 387 62.8
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 2.8e-140 502.7 400 59.5
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 4.8e-140 501.9 421 59.9
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 4.8e-140 501.9 392 62.8
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 6.3e-140 501.5 405 59.8
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 8.2e-140 501.1 442 56.1
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.4e-139 500.4 414 58.0
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.4e-139 499.6 414 58.0
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 2.4e-139 499.6 402 61.2
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 4.1e-139 498.8 402 61.2
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 4.1e-139 498.8 366 65.8
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 5.3e-139 498.4 421 58.2
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 6.9e-139 498.0 408 59.3
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 9.0e-139 497.7 406 58.9
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 9.0e-139 497.7 397 60.2
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.0e-138 496.5 409 59.7
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 5.9e-138 495.0 414 57.7
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 7.6e-138 494.6 418 58.6
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.0e-137 494.2 397 59.4
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.0e-137 494.2 399 61.2
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 1.0e-137 494.2 397 59.9
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 8.5e-137 491.1 407 58.7
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.4e-136 490.3 419 57.0
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.4e-136 490.3 404 57.2
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.9e-136 490.0 414 57.5
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 3.2e-136 489.2 395 61.0
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.2e-136 489.2 400 58.5
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 7.2e-136 488.0 399 57.4
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 7.2e-136 488.0 397 60.5
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 1.2e-135 487.3 401 60.1
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 8.8e-134 481.1 431 56.8
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 5.7e-133 478.4 399 55.9
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 5.7e-133 478.4 355 63.9
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 7.4e-133 478.0 430 54.2
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.3e-132 477.2 399 56.6
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 2.2e-132 476.5 400 56.8
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.2e-132 476.5 402 56.2
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.2e-132 476.5 400 56.5
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.8e-132 476.1 428 54.9
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 6.3e-132 474.9 402 56.0
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.1e-131 474.2 424 54.5
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 2.4e-131 473.0 430 53.3
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 7.2e-128 461.5 398 57.3
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 9.4e-128 461.1 363 62.8
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.6e-127 459.1 399 58.1
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.9e-126 455.7 331 67.7
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 9.7e-125 451.1 400 57.2
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.8e-123 446.8 406 54.4
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 3.1e-123 446.0 321 65.1
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 2.6e-122 443.0 396 56.3
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.0e-121 441.0 309 67.0
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.9e-121 439.5 409 53.3
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 9.4e-120 434.5 376 56.1
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.6e-119 433.7 411 55.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 1.1e-115 421.0 388 52.1
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.4e-115 420.6 310 63.2
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.4e-115 419.9 423 50.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.0e-114 416.8 344 59.6
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 2.9e-113 412.9 309 61.2
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 8.5e-113 411.4 411 52.8
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.5e-112 410.6 344 59.0
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.4e-110 404.1 389 49.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.3e-110 403.3 402 50.0
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.0e-110 402.5 334 60.2
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.2e-108 396.7 330 57.3
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 3.7e-108 396.0 429 45.9
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.3e-94 350.1 412 44.7
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 7.5e-77 292.0 236 60.2
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.2e-66 258.1 220 57.7
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 7.3e-64 248.8 198 58.6
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 2.2e-60 237.3 212 57.5
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 6.6e-57 225.7 241 49.4
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-53 214.9 130 76.2
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-53 214.9 130 76.2
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 4.8e-47 193.0 310 35.2
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 8.4e-44 182.2 160 56.9
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 7.4e-40 169.1 391 31.2
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 3.1e-30 137.1 135 51.9
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.4e-28 129.0 169 46.7
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.4e-28 129.0 169 46.7
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 8.2e-23 112.5 101 55.4
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 8.2e-23 112.5 70 72.9
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 2.0e-21 107.8 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 6.5e-20 102.8 75 62.7
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 5.1e-17 93.2 126 43.7
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 7.2e-11 72.8 75 45.3
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.8e-09 68.2 75 44.0
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 3.9e-09 67.0 87 37.9
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 5.1e-09 66.6 96 38.5
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 2.6e-08 64.3 78 39.7
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 2.4e-06 57.8 77 37.7


User provided reference genes

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