Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 9.6e-150 533.5 274 100.0
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.3e-73 279.3 229 69.4
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.4e-71 273.9 212 71.2
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 4.6e-51 205.7 200 63.0
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.0e-50 204.5 221 52.0
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 2.3e-50 203.4 235 53.6
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.5e-49 200.7 242 52.1
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 1.9e-49 200.3 232 50.9
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 2.5e-49 199.9 221 54.3
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 3.3e-49 199.5 222 52.3
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 6.2e-48 195.3 261 48.3
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 8.1e-48 194.9 243 50.2
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 8.1e-48 194.9 247 49.8
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.1e-47 194.5 238 50.8
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.8e-47 193.7 226 50.4
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 2.4e-47 193.4 204 55.4
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 2.4e-47 193.4 222 52.3
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 2.4e-47 193.4 227 51.1
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 3.1e-47 193.0 211 52.1
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 4.0e-47 192.6 222 51.4
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 5.3e-47 192.2 229 50.2
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 6.9e-47 191.8 221 52.5
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 6.9e-47 191.8 237 51.9
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 6.9e-47 191.8 231 51.1
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 1.2e-46 191.0 230 49.6
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.5e-46 190.7 228 54.4
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 2.6e-46 189.9 219 50.2
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 3.4e-46 189.5 220 50.9
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 7.6e-46 188.3 222 49.5
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 1.3e-45 187.6 182 54.9
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 1.7e-45 187.2 238 52.9
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 2.2e-45 186.8 220 49.5
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 2.2e-45 186.8 218 52.3
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 3.8e-45 186.0 233 51.1
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 6.4e-45 185.3 219 51.6
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 6.4e-45 185.3 222 51.4
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 6.4e-45 185.3 222 50.5
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.1e-44 184.5 217 49.8
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 1.9e-44 183.7 190 53.2
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 3.2e-44 183.0 190 55.3
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 4.2e-44 182.6 218 50.9
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 4.2e-44 182.6 230 47.8
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 4.2e-44 182.6 219 51.1
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 4.2e-44 182.6 226 50.0
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 5.4e-44 182.2 225 49.3
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 5.4e-44 182.2 169 58.0
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 9.3e-44 181.4 199 52.3
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 9.3e-44 181.4 229 51.5
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.2e-43 181.0 190 52.6
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 1.2e-43 181.0 229 51.1
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 2.1e-43 180.3 234 49.1
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 2.7e-43 179.9 218 48.2
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 3.5e-43 179.5 222 48.2
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 1.3e-42 177.6 220 50.0
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 3.0e-42 176.4 200 50.0
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 3.0e-42 176.4 194 57.2
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 3.0e-42 176.4 227 47.1
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 3.9e-42 176.0 194 57.2
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 6.7e-42 175.3 236 47.5
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 6.7e-42 175.3 225 47.6
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 8.7e-42 174.9 193 49.2
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 8.7e-42 174.9 224 47.8
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.1e-41 174.5 204 49.5
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.1e-41 174.5 230 48.7
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 1.5e-41 174.1 236 47.0
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.9e-41 173.7 210 48.6
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.9e-41 173.7 169 56.2
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 2.5e-41 173.3 230 47.4
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 3.3e-41 172.9 210 47.6
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 4.3e-41 172.6 230 48.7
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 4.3e-41 172.6 274 43.1
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 5.6e-41 172.2 210 48.1
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 7.4e-41 171.8 211 47.9
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 7.4e-41 171.8 210 47.6
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 9.6e-41 171.4 220 50.0
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 9.6e-41 171.4 234 44.9
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 9.6e-41 171.4 226 45.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 2.8e-40 169.9 180 56.7
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 6.2e-40 168.7 210 47.1
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 2.4e-39 166.8 161 56.5
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 5.3e-39 165.6 128 66.4
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 9.0e-39 164.9 149 59.7
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.2e-38 164.5 174 55.2
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.9e-36 157.1 191 49.2
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.2e-36 156.4 213 46.5
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.2e-36 156.0 209 47.4
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 2.1e-35 153.7 177 53.1
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 5.6e-33 145.6 190 45.8
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 2.4e-31 140.2 217 42.4
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 3.2e-28 129.8 168 39.9
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 6.0e-27 125.6 171 40.4
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.5e-25 120.2 222 39.2
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.3e-24 117.9 115 53.9
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 3.7e-24 116.3 122 53.3
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 4.8e-24 115.9 188 37.8
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 9.0e-23 111.7 162 39.5
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.9e-21 106.7 134 48.5
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.8e-18 97.4 87 57.5
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 4.3e-17 92.8 68 66.2
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 4.3e-17 92.8 95 49.5
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 5.7e-17 92.4 94 53.2
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 2.4e-15 87.0 97 49.5
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 4.5e-14 82.8 181 33.7
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 1.4e-12 77.8 89 49.4
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.7e-08 64.3 89 42.7
Oeu034465.1 Olea europaea HOM05D000691 ORTHO05D000378 2.0e-06 57.4 61 45.9
Oeu042671.1 Olea europaea HOM05D000691 ORTHO05D000378 7.7e-06 55.5 59 44.1


User provided reference genes

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