Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 7.0e-133 477.2 234 100.0
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 6.8e-96 354.4 234 72.6
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.2e-89 333.6 223 73.5
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.3e-74 282.3 198 69.7
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.4e-71 272.3 172 76.7
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 6.7e-43 178.3 234 45.3
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 1.1e-42 177.6 233 45.1
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 4.4e-42 175.6 232 43.1
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.7e-42 175.3 232 42.7
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.3e-41 174.1 232 42.7
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 5.3e-40 168.7 232 44.4
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.2e-39 167.5 225 42.2
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.6e-39 166.4 226 43.8
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 5.9e-39 165.2 226 45.6
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 7.7e-39 164.9 225 44.4
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 1.3e-38 164.1 232 44.0
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 5.0e-38 162.2 236 43.2
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.4e-37 160.6 234 42.7
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.4e-37 160.6 232 43.5
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.9e-37 160.2 225 42.7
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.9e-37 160.2 227 44.1
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.2e-37 159.5 225 43.6
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 3.2e-37 159.5 221 43.4
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 9.4e-37 157.9 236 41.1
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.2e-36 157.5 226 45.6
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.6e-36 157.1 227 40.5
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.7e-36 156.4 225 42.7
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 3.6e-36 156.0 225 43.6
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 3.6e-36 156.0 225 43.6
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 3.6e-36 156.0 236 39.8
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 3.6e-36 156.0 227 42.7
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 4.7e-36 155.6 224 42.9
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 6.1e-36 155.2 226 45.6
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 6.1e-36 155.2 219 39.3
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.8e-35 153.7 228 41.7
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 2.3e-35 153.3 228 43.0
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.0e-35 152.9 224 40.6
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 5.2e-35 152.1 236 41.9
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 5.2e-35 152.1 227 41.9
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.7e-35 151.8 224 42.4
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 8.8e-35 151.4 224 42.0
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.1e-34 151.0 219 42.9
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.1e-34 151.0 225 40.4
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.5e-34 150.6 227 42.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.6e-34 149.8 236 41.9
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.3e-34 149.4 219 38.8
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 4.4e-34 149.1 223 39.9
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 5.7e-34 148.7 226 41.2
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 7.4e-34 148.3 228 42.1
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 7.4e-34 148.3 228 42.1
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 9.7e-34 147.9 231 40.7
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 9.7e-34 147.9 231 40.7
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 9.7e-34 147.9 232 40.5
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.7e-33 147.1 228 39.9
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 2.2e-33 146.7 227 39.6
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 6.3e-33 145.2 234 38.9
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.1e-32 144.4 228 40.8
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.4e-32 143.3 218 39.0
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 3.1e-32 142.9 232 39.2
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 3.1e-32 142.9 179 48.0
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.3e-32 142.1 224 39.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 2.6e-31 139.8 221 38.5
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 3.5e-31 139.4 224 40.2
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 5.9e-31 138.7 222 38.7
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.0e-30 137.9 219 37.0
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.2e-30 136.7 224 36.6
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 8.5e-30 134.8 220 38.2
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 8.5e-30 134.8 221 36.7
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 1.1e-29 134.4 220 40.0
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.1e-29 134.4 214 40.7
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.5e-29 134.0 223 39.9
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 2.5e-29 133.3 224 34.8
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 4.2e-29 132.5 261 33.7
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 9.4e-29 131.3 228 36.8
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 2.1e-28 130.2 249 35.3
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.1e-28 130.2 225 35.1
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.1e-28 130.2 224 37.9
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 2.7e-28 129.8 224 39.7
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 4.7e-28 129.0 228 36.0
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 4.7e-28 129.0 219 38.8
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 1.0e-27 127.9 227 37.9
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.0e-27 127.9 203 39.9
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.0e-27 127.9 203 39.9
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.4e-27 127.5 231 36.8
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 4.0e-27 125.9 167 44.9
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 5.2e-27 125.6 222 34.2
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 8.8e-27 124.8 224 36.2
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.2e-26 124.4 222 36.0
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 5.7e-26 122.1 229 37.6
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.7e-25 120.6 207 38.6
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 2.8e-25 119.8 236 36.0
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 1.8e-24 117.1 207 36.7
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.8e-24 117.1 223 35.4
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.8e-24 117.1 234 37.2
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 4.1e-24 115.9 214 36.9
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 5.3e-24 115.5 208 38.0
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 7.0e-24 115.2 207 37.7
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 7.0e-24 115.2 225 35.1
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 9.1e-24 114.8 207 36.7
AUR62037876 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.5e-23 112.8 94 62.8
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 5.9e-23 112.1 216 34.7
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.7e-22 110.5 208 35.6
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 2.9e-22 109.8 216 31.9
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 2.9e-22 109.8 191 39.3
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 3.8e-22 109.4 229 33.6
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 4.2e-21 105.9 163 40.5
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 1.2e-20 104.4 226 35.0
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 5.2e-19 99.0 207 34.8
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 7.5e-18 95.1 215 34.9
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.3e-17 94.4 235 29.4
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 1.7e-17 94.0 232 31.5
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.7e-17 94.0 227 33.5
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.5e-15 86.3 87 49.4
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.5e-15 86.3 87 49.4
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 4.7e-12 75.9 167 29.3
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 8.0e-12 75.1 104 41.3
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 3.0e-11 73.2 216 27.8
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 8.8e-11 71.6 159 35.2
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.2e-10 71.2 167 29.3
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 3.7e-09 66.2 205 33.2
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.6e-07 60.8 36 75.0
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.0e-06 58.2 85 38.8


User provided reference genes

Program Settings