Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 4.5e-147 524.6 274 100.0
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 4.7e-88 328.6 230 77.8
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 6.4e-85 318.2 230 77.0
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 9.6e-57 224.6 217 58.5
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 3.1e-39 166.4 221 50.2
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 2.6e-38 163.3 218 48.2
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 2.6e-38 163.3 216 46.8
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 9.9e-38 161.4 220 46.4
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 4.9e-37 159.1 218 46.8
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.7e-35 153.3 222 46.4
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 4.6e-35 152.5 220 45.0
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 7.9e-35 151.8 217 47.5
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.8e-34 150.6 217 45.6
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 6.7e-34 148.7 210 48.1
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 6.7e-34 148.7 217 44.7
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 8.7e-34 148.3 231 45.0
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.1e-33 147.9 237 43.0
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.5e-33 146.7 222 45.5
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 2.5e-33 146.7 219 44.3
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 5.6e-33 145.6 219 43.8
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 7.4e-33 145.2 226 46.5
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 2.1e-32 143.7 221 44.3
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 2.1e-32 143.7 217 45.2
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.1e-32 143.7 256 43.0
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 1.1e-31 141.4 236 41.9
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.8e-31 140.6 217 44.2
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 2.4e-31 140.2 221 43.0
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.4e-31 140.2 220 43.6
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 4.0e-31 139.4 205 45.9
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 2.6e-30 136.7 204 40.7
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 3.4e-30 136.3 193 45.6
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 3.4e-30 136.3 204 48.5
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 5.8e-30 135.6 218 44.0
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 7.6e-30 135.2 225 40.4
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.3e-29 134.4 225 44.0
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 3.8e-29 132.9 223 41.3
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 4.9e-29 132.5 218 44.0
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 6.5e-29 132.1 245 41.6
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 8.4e-29 131.7 229 42.8
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 1.1e-28 131.3 218 43.6
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 3.2e-28 129.8 221 41.2
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.2e-27 127.9 218 38.5
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.1e-27 127.1 228 39.0
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 2.7e-27 126.7 200 42.5
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 4.6e-27 125.9 229 40.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.3e-26 124.4 218 39.9
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.3e-26 124.4 223 40.4
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 2.3e-26 123.6 228 41.2
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 6.7e-26 122.1 216 42.1
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 6.7e-26 122.1 269 35.7
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 6.7e-26 122.1 224 41.1
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 8.7e-26 121.7 204 45.1
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 8.7e-26 121.7 236 39.8
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 8.7e-26 121.7 238 39.5
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.5e-25 120.9 169 45.0
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.5e-25 120.9 232 38.4
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.9e-25 120.6 225 40.4
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.9e-25 120.6 191 42.9
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.9e-25 120.6 216 42.1
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 4.3e-25 119.4 220 43.6
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 7.4e-25 118.6 223 35.9
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 9.7e-25 118.2 223 35.9
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 3.7e-24 116.3 206 37.4
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.1e-23 114.8 218 38.5
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.4e-23 114.4 181 44.2
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.4e-23 113.6 215 38.1
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 3.1e-23 113.2 172 43.0
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 3.1e-23 113.2 221 35.3
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 4.1e-23 112.8 205 41.5
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 6.9e-23 112.1 229 38.4
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 9.0e-23 111.7 221 38.5
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.5e-22 110.9 221 35.7
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.6e-22 110.2 211 37.9
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 5.9e-22 109.0 218 41.3
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.0e-21 108.2 197 39.1
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 2.9e-21 106.7 207 41.1
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 2.9e-21 106.7 219 39.3
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 3.8e-21 106.3 207 40.6
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 5.0e-21 105.9 236 37.3
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 6.5e-21 105.5 212 38.7
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 6.5e-21 105.5 211 37.0
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.5e-20 103.6 221 40.3
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 4.2e-20 102.8 204 37.3
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 5.5e-20 102.4 209 39.2
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 7.2e-20 102.1 217 36.9
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 9.3e-20 101.7 195 38.5
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 2.1e-19 100.5 194 38.1
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 3.6e-19 99.8 203 39.9
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 6.1e-19 99.0 197 35.5
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 6.1e-19 99.0 194 37.6
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 7.9e-19 98.6 196 38.3
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 7.9e-19 98.6 198 34.8
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 2.3e-18 97.1 217 35.0
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 3.0e-18 96.7 213 36.6
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 3.9e-18 96.3 271 33.2
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 6.7e-18 95.5 159 47.8
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 1.9e-17 94.0 220 38.2
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 5.7e-17 92.4 220 38.6
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.3e-16 91.3 147 38.8
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 1.7e-16 90.9 244 34.4
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.7e-16 90.9 224 33.0
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 6.3e-16 89.0 231 35.9
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 8.2e-16 88.6 221 33.5
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 8.2e-16 88.6 235 36.2
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 3.1e-15 86.7 223 34.5
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 5.3e-15 85.9 189 34.4
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 2.6e-14 83.6 220 35.5
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.4e-14 83.2 91 45.1
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 3.4e-14 83.2 225 33.3
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 4.5e-14 82.8 214 33.2
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 5.9e-14 82.4 212 35.8
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 1.1e-12 78.2 151 35.1
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 1.1e-12 78.2 184 35.3
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 9.4e-12 75.1 219 34.7
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 9.4e-12 75.1 182 31.9
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 1.4e-10 71.2 88 38.6
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 2.0e-09 67.4 172 30.8
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 2.0e-09 67.4 182 34.1
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 6.3e-08 62.4 62 48.4
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.3e-08 62.4 150 32.7
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.2e-06 58.2 151 34.4


User provided reference genes

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