Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 3.4e-200 701.4 353 100.0
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 9.8e-155 550.4 352 77.6
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 9.8e-155 550.4 343 79.0
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.7e-154 549.7 343 79.0
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.7e-154 548.5 345 77.4
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.4e-153 546.6 343 78.7
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.8e-153 546.2 351 77.5
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 5.4e-153 544.7 345 78.3
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 7.0e-153 544.3 351 76.4
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.6e-152 543.1 348 78.4
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 4.6e-152 541.6 349 77.7
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.0e-151 540.4 348 76.7
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.7e-151 539.7 352 77.0
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 2.3e-151 539.3 347 78.4
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 5.0e-151 538.1 352 73.6
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 6.6e-151 537.7 346 77.7
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 6.6e-151 537.7 350 76.0
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 6.6e-151 537.7 346 76.9
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 6.6e-151 537.7 345 75.9
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 8.6e-151 537.3 345 76.5
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 8.6e-151 537.3 322 80.4
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 8.6e-151 537.3 352 77.3
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 8.6e-151 537.3 319 81.8
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.9e-150 536.2 348 75.9
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.3e-150 535.4 347 78.1
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 3.3e-150 535.4 338 78.4
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 4.3e-150 535.0 350 77.4
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 7.3e-150 534.3 344 75.6
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 9.5e-150 533.9 347 75.2
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.6e-149 533.1 347 77.8
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.2e-149 531.2 350 75.7
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 8.0e-149 530.8 350 76.0
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 2.3e-148 529.3 351 72.6
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 4.0e-148 528.5 317 79.8
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 5.2e-148 528.1 347 75.2
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 5.2e-148 528.1 318 78.3
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 6.8e-148 527.7 344 73.8
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.5e-147 526.6 351 72.4
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.5e-147 526.6 331 76.1
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.5e-147 526.6 349 73.4
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 2.0e-147 526.2 344 74.4
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 2.0e-147 526.2 318 79.6
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 3.4e-147 525.4 353 75.6
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 4.4e-147 525.0 349 72.8
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 5.8e-147 524.6 344 73.5
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 7.5e-147 524.2 344 73.8
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 7.5e-147 524.2 344 73.8
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 9.8e-147 523.9 355 73.5
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.3e-146 523.5 336 76.5
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.3e-146 523.5 345 74.8
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 2.2e-146 522.7 347 74.4
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 2.9e-146 522.3 331 77.6
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 3.7e-146 521.9 344 72.4
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 4.9e-146 521.5 344 73.5
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 4.9e-146 521.5 346 74.3
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.1e-145 520.4 329 76.3
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.4e-145 520.0 343 74.6
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 4.1e-145 518.5 344 73.3
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 4.1e-145 518.5 344 73.0
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 5.4e-145 518.1 349 75.1
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 5.4e-145 518.1 318 77.7
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 7.0e-145 517.7 347 73.8
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 9.2e-145 517.3 342 73.7
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.2e-144 516.9 339 75.5
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.2e-144 516.9 311 81.7
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 3.5e-144 515.4 348 73.3
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 3.0e-143 512.3 349 70.8
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.1e-142 510.4 346 72.8
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.5e-142 510.0 343 75.5
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.9e-142 509.6 336 75.0
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 3.3e-142 508.8 313 76.4
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 9.5e-142 507.3 344 73.0
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 8.1e-141 504.2 349 69.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.1e-140 503.8 343 71.7
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.3e-140 502.7 343 73.8
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 4.0e-140 501.9 343 73.5
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.0e-139 499.6 379 69.4
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.1e-137 493.8 333 71.8
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.1e-137 493.8 340 73.2
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.3e-135 486.9 330 70.9
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 3.9e-135 485.3 351 72.4
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 4.3e-134 481.9 339 69.0
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 6.0e-128 461.5 320 69.7
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 2.3e-127 459.5 347 71.5
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 3.0e-127 459.1 323 68.4
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.9e-127 458.8 343 69.4
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.5e-126 456.8 263 84.8
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 5.2e-124 448.4 333 66.7
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.6e-115 419.5 343 64.7
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 7.6e-115 417.9 398 57.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.7e-114 416.8 341 62.8
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.8e-111 406.8 329 65.0
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 2.4e-108 396.4 230 83.9
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 9.0e-108 394.4 342 62.3
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 4.2e-105 385.6 531 46.1
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.1e-104 383.3 343 63.6
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 1.5e-102 377.1 223 84.3
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 9.3e-97 357.8 244 72.5
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.1e-86 324.3 193 79.3
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 5.7e-78 295.4 306 53.3
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.4e-75 286.2 166 79.5
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 7.0e-68 261.9 178 73.0
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 3.5e-67 259.6 420 38.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 4.5e-67 259.2 218 56.4
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 6.1e-64 248.8 328 43.6
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.1e-57 228.0 131 79.4
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 9.1e-52 208.4 130 77.7
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 9.5e-49 198.4 347 38.3
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.1e-44 184.9 346 34.7
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.8e-44 184.1 126 70.6
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.6e-41 172.6 98 84.7
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.6e-38 163.7 112 67.9
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.6e-35 154.5 84 88.1
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.7e-26 124.4 83 72.3
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.5e-25 121.3 64 85.9
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 4.7e-16 89.7 77 58.4
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.3e-13 81.6 56 73.2
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.5e-11 73.6 44 70.5
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 9.0e-07 58.9 56 57.1
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 1.2e-06 58.5 59 47.5
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 7.6e-06 55.8 30 83.3


User provided reference genes

Program Settings