Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01649 Beta vulgaris HOM05D001695 ORTHO05D002735 3.2e-130 468.4 231 100.0
EL10Ac4g08987 Beta vulgaris HOM05D001695 ORTHO05D002735 5.2e-96 354.8 199 90.5
EL10Ac5g12416 Beta vulgaris HOM05D001695 ORTHO05D002735 4.0e-80 302.0 158 93.0
EL10Ac6g14898 Beta vulgaris HOM05D001695 ORTHO05D002735 4.4e-71 271.9 135 98.5
EL10Ac6g13092 Beta vulgaris HOM05D000255 ORTHO05D002735 4.1e-69 265.4 133 97.7
EL10Ac2g04141 Beta vulgaris HOM05D001695 ORTHO05D002735 1.6e-52 210.3 112 92.9
AUR62019928 Chenopodium quinoa HOM05D001695 ORTHO05D002735 2.1e-49 199.9 138 76.8
AUR62007063 Chenopodium quinoa HOM05D001695 ORTHO05D002735 4.0e-48 195.7 138 75.4
Sc01g0010750 Simmondsia chinensis HOM05D001695 ORTHO05D002735 4.4e-39 165.6 136 64.7
FAN08G2153 Fragaria x ananassa HOM05D001695 ORTHO05D002735 4.9e-38 162.2 136 64.7
FAN13G1073 Fragaria x ananassa HOM05D001695 ORTHO05D002735 4.9e-38 162.2 136 64.7
FvH4_5g10820 Fragaria vesca HOM05D001695 ORTHO05D002735 1.1e-37 161.0 136 63.2
Haze_09183 Corylus avellana HOM05D001695 ORTHO05D002735 1.4e-37 160.6 137 62.0
FAN04G1351 Fragaria x ananassa HOM05D001695 ORTHO05D002735 1.4e-37 160.6 136 64.0
FAN18G1376 Fragaria x ananassa HOM05D001695 ORTHO05D002735 3.2e-37 159.5 136 62.5
Prupe.5G131200 Prunus persica HOM05D001695 ORTHO05D002735 9.3e-37 157.9 136 63.2
RcHm_v2.0_Chr7g0187341 Rosa chinensis HOM05D001695 ORTHO05D002735 9.3e-37 157.9 136 64.0
Nn1g00413 Nelumbo nucifera HOM05D001695 ORTHO05D002735 1.6e-36 157.1 135 60.7
Migut.E00301 Erythranthe guttata HOM05D001695 ORTHO05D002735 2.1e-36 156.8 139 59.0
Peaxi162Scf01257g00030 Petunia axillaris HOM05D001695 ORTHO05D002735 2.7e-36 156.4 128 63.3
QL02p027749 Quercus lobata HOM05D001695 ORTHO05D002735 3.5e-36 156.0 137 64.2
Rhsim07G0077100 Rhododendron simsii HOM05D001695 ORTHO05D002735 3.5e-36 156.0 136 60.3
Lj2A156T52 Lonicera japonica HOM05D001695 ORTHO05D002735 4.6e-36 155.6 136 63.2
vmacro13844 Vaccinium macrocarpon HOM05D001695 ORTHO05D002735 4.6e-36 155.6 135 62.2
Dinv18744 Davidia involucrata HOM05D001695 ORTHO05D002735 6.0e-36 155.2 137 62.0
MD14G1137300 Malus domestica HOM05D001695 ORTHO05D002735 7.8e-36 154.8 136 63.2
Oeu010736.1 Olea europaea HOM05D001695 ORTHO05D002735 7.8e-36 154.8 141 63.1
Actinidia27283 Actinidia chinensis HOM05D001695 ORTHO05D002735 2.3e-35 153.3 135 60.7
CiPaw.12G076600 Carya illinoinensis HOM05D001695 ORTHO05D002735 2.3e-35 153.3 136 61.8
TWI60G1658 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 3.0e-35 152.9 102 72.5
Hund02284 Selenicereus undatus HOM05D001695 ORTHO05D002735 3.9e-35 152.5 137 59.9
MSTRG.13709 Avicennia marina HOM05D001695 ORTHO05D002735 5.1e-35 152.1 135 60.7
Glyma.02G088200 Glycine max HOM05D001695 ORTHO05D002735 5.1e-35 152.1 140 61.4
CAN.G792.21 Capsicum annuum HOM05D001695 ORTHO05D002735 6.6e-35 151.8 137 58.4
HanXRQChr03g0085241 Helianthus annuus HOM05D001695 ORTHO05D002735 6.6e-35 151.8 136 61.8
CSS0020159 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 8.7e-35 151.4 144 59.7
Duzib205G0936 Durio zibethinus HOM05D001695 ORTHO05D002735 8.7e-35 151.4 136 60.3
Eucgr.D01676 Eucalyptus grandis HOM05D001695 ORTHO05D002735 1.1e-34 151.0 107 69.2
Thecc.03G219900 Theobroma cacao HOM05D001695 ORTHO05D002735 1.1e-34 151.0 136 58.8
DCAR_006556 Daucus carota HOM05D001695 ORTHO05D002735 1.9e-34 150.2 136 59.6
PGR031G0821 Punica granatum HOM05D001695 ORTHO05D002735 1.9e-34 150.2 134 63.4
CSS0006818 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 3.3e-34 149.4 144 59.0
Ciclev10021724m.g Citrus clementina HOM05D001695 ORTHO05D002735 5.6e-34 148.7 139 61.2
MELO3C013771.2 Cucumis melo HOM05D001695 ORTHO05D002735 5.6e-34 148.7 139 59.7
Glyma.13G001100 Glycine max HOM05D001695 ORTHO05D002735 9.6e-34 147.9 110 67.3
Potri.001G083300 Populus trichocarpa HOM05D001695 ORTHO05D002735 9.6e-34 147.9 138 62.3
Sabra01G0059900 Salix brachista HOM05D001695 ORTHO05D002735 9.6e-34 147.9 137 61.3
CANSAT21G0810 Cannabis sativa HOM05D001695 ORTHO05D002735 1.6e-33 147.1 136 59.6
COL.COLO4_10808 Corchorus olitorius HOM05D001695 ORTHO05D002735 2.1e-33 146.7 100 71.0
Nitab4.5_0000673g0210 Nicotiana tabacum HOM05D001695 ORTHO05D002735 2.8e-33 146.4 152 55.3
Sp2g00880 Schrenkiella parvula HOM05D001695 ORTHO05D002735 2.8e-33 146.4 115 63.5
CsaV3_3G000840 Cucumis sativus L. HOM05D001695 ORTHO05D002735 4.8e-33 145.6 137 59.1
PSO135G0900 Papaver somniferum HOM05D001695 ORTHO05D002735 6.2e-33 145.2 143 57.3
PGSC0003DMG402005859 Solanum tuberosum HOM05D001695 ORTHO05D002735 6.2e-33 145.2 100 69.0
TAR629G0227 Trochodendron aralioides HOM05D001695 ORTHO05D002735 6.2e-33 145.2 135 61.5
ClCG10G000790 Citrullus lanatus HOM05D001695 ORTHO05D002735 8.1e-33 144.8 134 59.0
BcaB07g31412 Brassica carinata HOM05D001695 ORTHO05D002735 1.1e-32 144.4 110 64.5
Cpa.g.sc15.141 Carica papaya HOM05D001695 ORTHO05D002735 1.4e-32 144.1 100 72.0
VMungo0540G1432 Vigna mungo HOM05D001695 ORTHO05D002735 1.4e-32 144.1 104 71.2
BcaC04g22681 Brassica carinata HOM05D001695 ORTHO05D002735 2.4e-32 143.3 110 64.5
Lj6g0013848 Lotus japonicus HOM05D001695 ORTHO05D002735 2.4e-32 143.3 135 59.3
Solyc08g008630.4 Solanum lycopersicum HOM05D001695 ORTHO05D002735 2.4e-32 143.3 100 67.0
Atru.chr9.1867 Acer truncatum HOM05D001695 ORTHO05D002735 3.1e-32 142.9 142 59.2
A09p15280 Brassica napus HOM05D001695 ORTHO05D002735 3.1e-32 142.9 109 63.3
BraA09t37174Z Brassica rapa HOM05D001695 ORTHO05D002735 5.3e-32 142.1 109 62.4
Lsat_1_v5_gn_6_81741 Lactuca sativa HOM05D001695 ORTHO05D002735 5.3e-32 142.1 138 58.0
Aqoxy7G00010 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 6.9e-32 141.7 136 58.1
Manes.02G002100 Manihot esculenta HOM05D001695 ORTHO05D002735 6.9e-32 141.7 136 59.6
Sopen08g004470 Solanum pennellii HOM05D001695 ORTHO05D002735 6.9e-32 141.7 100 66.0
Aa31LG2G1720 Aethionema arabicum HOM05D001695 ORTHO05D002735 9.0e-32 141.4 132 57.6
C09p16720 Brassica napus HOM05D001695 ORTHO05D002735 9.0e-32 141.4 110 64.5
BolC9t54572H Brassica oleracea HOM05D001695 ORTHO05D002735 9.0e-32 141.4 110 64.5
BraA09t37040Z Brassica rapa HOM05D001695 ORTHO05D002735 9.0e-32 141.4 110 64.5
A09p13940 Brassica napus HOM05D001695 ORTHO05D002735 1.5e-31 140.6 110 63.6
Phvul.006G009940 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 2.0e-31 140.2 106 67.9
THA.LOC104817401 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 4.5e-31 139.0 111 66.7
Medtr3g080840 Medicago truncatula HOM05D001695 ORTHO05D002735 5.8e-31 138.7 141 56.7
CARHR046210 Cardamine hirsuta HOM05D001695 ORTHO05D002735 7.6e-31 138.3 99 67.7
Gohir.A02G098400 Gossypium hirsutum HOM05D001695 ORTHO05D002735 1.3e-30 137.5 100 69.0
Thhalv10023652m.g Eutrema salsugineum HOM05D001695 ORTHO05D002735 1.7e-30 137.1 110 62.7
TPR.G21319 Trifolium pratense HOM05D001695 ORTHO05D002735 2.2e-30 136.7 106 67.0
Gohir.D03G085266 Gossypium hirsutum HOM05D001695 ORTHO05D002735 2.9e-30 136.3 100 68.0
Cfa011915 Carpinus fangiana HOM05D001695 ORTHO05D002735 3.8e-30 136.0 96 69.8
Gorai.003G077200 Gossypium raimondii HOM05D001695 ORTHO05D002735 3.8e-30 136.0 100 68.0
Sed0011976 Sechium edule HOM05D001695 ORTHO05D002735 3.8e-30 136.0 139 56.1
AL2G10080 Arabidopsis lyrata HOM05D001695 ORTHO05D002735 4.9e-30 135.6 99 67.7
AT1G64680 Arabidopsis thaliana HOM05D001695 ORTHO05D002735 4.9e-30 135.6 99 67.7
BcaB07g31548 Brassica carinata HOM05D001695 ORTHO05D002735 6.4e-30 135.2 112 63.4
Carub.0002s0005 Capsella rubella HOM05D001695 ORTHO05D002735 6.4e-30 135.2 99 64.6
BcaC04g22506 Brassica carinata HOM05D001695 ORTHO05D002735 8.4e-30 134.8 111 60.4
C09p18560 Brassica napus HOM05D001695 ORTHO05D002735 8.4e-30 134.8 111 60.4
BolC9t54752H Brassica oleracea HOM05D001695 ORTHO05D002735 8.4e-30 134.8 111 60.4
ATR0579G157 Amborella trichopoda HOM05D001695 ORTHO05D002735 1.1e-29 134.4 101 70.3
CDE11G0902 Ceratophyllum demersum HOM05D001695 ORTHO05D002735 3.2e-29 132.9 100 68.0
Psat5g110120 Pisum sativum HOM05D001695 ORTHO05D002735 5.4e-29 132.1 140 55.7
MBI12_g48067_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 1.2e-28 131.0 107 64.5
arahy.Tifrunner.gnm1.ann1.AGX1S0 Arachis hypogaea HOM05D001695 ORTHO05D002735 1.0e-27 127.9 147 54.4
MBI12_g44350_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 1.0e-27 127.9 107 62.6
arahy.Tifrunner.gnm1.ann1.HKF9H0 Arachis hypogaea HOM05D001695 ORTHO05D002735 1.3e-27 127.5 146 54.1
Lalb_Chr24g0402771 Lupinus albus HOM05D001695 ORTHO05D002735 1.3e-27 127.5 140 52.9
Ca_16296_v3 Cicer arietinum L. HOM05D001695 ORTHO05D002735 3.0e-27 126.3 142 54.2
Hma1.2p1_0456F.1_g156720 Hydrangea macrophylla HOM05D001695 ORTHO05D002735 3.0e-27 126.3 114 59.6
unitig_27.g25209 Utricularia gibba HOM05D001695 ORTHO05D002735 1.5e-26 124.0 100 63.0
Nitab4.5_0005544g0020 Nicotiana tabacum HOM05D001695 ORTHO05D002735 4.3e-26 122.5 98 64.3
ECA240G2548 Erigeron canadensis HOM05D001695 ORTHO05D002735 1.4e-24 117.5 87 67.8
Zm00001eb260820 Zea mays HOM05D001695 ORTHO05D002735 3.1e-24 116.3 103 62.1
Os08g0114100 Oryza sativa ssp. japonica HOM05D001695 ORTHO05D002735 3.8e-22 109.4 109 57.8
SEGI_06911 Sequoiadendron giganteum HOM05D001695 ORTHO05D002735 1.9e-21 107.1 110 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2007 Anthoceros agrestis HOM05D001695 ORTHO05D002735 5.5e-21 105.5 106 50.9
SMO145G0294 Selaginella moellendorffii HOM05D001695 ORTHO05D002735 7.1e-21 105.1 101 53.5
Pp3c26_11090 Physcomitrium patens HOM05D001695 ORTHO05D002735 7.9e-20 101.7 107 49.5
SGA_v2.0_scaffold267G46183 Striga asiatica HOM05D001695 ORTHO05D002735 1.3e-19 100.9 108 50.9
Mapoly0052s0029 Marchantia polymorpha HOM05D001695 ORTHO05D002735 3.9e-19 99.4 104 50.0
SMO145G0173 Selaginella moellendorffii HOM05D001695 ORTHO05D002735 5.6e-18 95.5 110 48.2
MD06G1120600 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-17 93.6 137 46.0
Cc08_g16830 Coffea canephora HOM05D001695 ORTHO05D002735 1.1e-16 91.3 65 72.3
TWI15G1003 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 9.0e-16 88.2 78 57.7
Nn5g29481 Nelumbo nucifera HOM05D001695 ORTHO05D002735 1.7e-14 84.0 63 63.5
CBR_g8844 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-14 83.6 97 48.5
BcaB07g34121 Brassica carinata HOM05D001695 ORTHO05D002735 3.8e-14 82.8 66 63.6
EL10Ac8g19755 Beta vulgaris HOM05D000621 ORTHO05D000421 4.9e-14 82.4 41 90.2
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 9.3e-13 78.2 102 47.1
EL10Ac6g14102 Beta vulgaris HOM05D005208 ORTHO05D006415 3.7e-09 66.2 31 93.5
EL10Ac4g09498 Beta vulgaris HOM05D000621 ORTHO05D000421 2.0e-07 60.5 28 85.7
Pp3c9_19810 Physcomitrium patens HOM05D001695 ORTHO05D002735 7.7e-07 58.5 100 32.0
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 2.9e-06 56.6 76 40.8
Ca_10185_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 5.0e-06 55.8 37 64.9
arahy.Tifrunner.gnm1.ann1.492HD2 Arachis hypogaea HOM05D000621 ORTHO05D000421 8.5e-06 55.1 28 78.6
arahy.Tifrunner.gnm1.ann1.CG4MLB Arachis hypogaea HOM05D000621 ORTHO05D000421 8.5e-06 55.1 28 78.6
Nn2g13290 Nelumbo nucifera HOM05D001695 ORTHO05D002735 8.5e-06 55.1 48 52.1


User provided reference genes

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