Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 2.4e-247 858.6 512 100.0
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 1.3e-128 464.2 484 68.6
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 3.2e-106 389.8 504 60.1
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 9.7e-79 298.5 293 78.8
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 7.7e-76 288.9 415 55.9
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 8.0e-65 252.3 364 52.5
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 1.8e-64 251.1 431 52.4
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 6.8e-64 249.2 469 49.9
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 5.7e-63 246.1 349 58.7
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 1.7e-62 244.6 421 42.3
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 3.1e-61 240.4 430 34.2
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 5.9e-60 236.1 397 51.9
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 4.3e-58 229.9 368 36.4
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 1.2e-57 228.4 361 52.9
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 6.1e-57 226.1 382 39.5
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 1.8e-56 224.6 436 45.0
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 2.3e-56 224.2 424 47.2
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 6.8e-56 222.6 379 41.4
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 2.9e-54 217.2 441 47.4
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 2.4e-53 214.2 366 53.0
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 4.1e-53 213.4 404 46.8
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 5.4e-53 213.0 362 49.4
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 9.2e-53 212.2 366 50.0
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 9.2e-53 212.2 398 50.3
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 1.6e-52 211.5 366 49.2
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 2.7e-52 210.7 368 53.8
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 2.7e-52 210.7 368 53.8
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 2.7e-52 210.7 370 48.1
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 3.5e-52 210.3 379 34.3
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 5.9e-52 209.5 400 50.8
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 7.8e-52 209.1 343 47.8
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 7.8e-52 209.1 445 41.3
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 1.7e-51 208.0 445 41.3
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 3.0e-51 207.2 444 40.1
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 1.1e-50 205.3 486 36.0
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 1.5e-50 204.9 485 32.2
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 9.5e-50 202.2 363 46.0
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 1.6e-49 201.4 352 47.4
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 1.6e-49 201.4 460 40.4
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 1.6e-49 201.4 362 49.4
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 1.4e-48 198.4 457 43.3
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 1.8e-48 198.0 355 42.5
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 3.7e-46 190.3 372 49.5
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 6.4e-46 189.5 366 37.2
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 1.4e-45 188.3 354 51.7
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 1.4e-45 188.3 363 47.1
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 2.4e-45 187.6 354 52.0
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 5.4e-45 186.4 471 39.1
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 7.0e-45 186.0 335 47.2
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 7.0e-45 186.0 426 31.0
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 1.1e-42 178.7 358 32.4
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 9.5e-42 175.6 469 42.6
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 1.2e-41 175.3 415 45.8
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 6.2e-41 172.9 327 45.0
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 8.1e-41 172.6 457 40.7
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 8.1e-41 172.6 467 40.5
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 1.5e-39 168.3 372 46.2
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 9.2e-37 159.1 441 40.4
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 1.2e-36 158.7 367 43.1
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 6.0e-36 156.4 276 51.1
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 1.7e-35 154.8 225 38.7
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 2.3e-35 154.5 364 42.9
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 3.9e-35 153.7 451 39.7
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 1.9e-34 151.4 377 29.4
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 2.8e-33 147.5 291 48.1
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 8.9e-32 142.5 372 43.5
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 3.4e-31 140.6 283 54.1
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 1.7e-30 138.3 363 26.7
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 1.7e-30 138.3 363 26.7
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 1.4e-29 135.2 367 27.2
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 9.2e-29 132.5 272 29.0
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 1.2e-28 132.1 362 27.9
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 2.7e-28 131.0 472 38.6
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 6.2e-25 119.8 388 26.5
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 4.0e-24 117.1 235 54.5
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 6.9e-24 116.3 296 25.3
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 3.8e-22 110.5 343 44.6
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 6.0e-20 103.2 281 46.3
Hund17562 Selenicereus undatus HOM05D007884 ORTHO05D009968 1.1e-13 82.4 59 66.1
SEGI_26452 Sequoiadendron giganteum HOM05D007884 ORTHO05D009968 5.4e-13 80.1 370 40.5
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 4.8e-09 67.0 186 60.2
Sp2g17890 Schrenkiella parvula HOM05D007093 ORTHO05D008910 8.4e-06 56.2 143 26.6


User provided reference genes

Program Settings