Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 5.4e-226 787.3 397 100.0
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 8.9e-213 743.4 397 93.5
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 2.7e-193 678.7 363 91.2
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 6.8e-189 664.1 397 84.1
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 3.8e-179 631.7 399 77.7
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 6.0e-177 624.4 405 76.5
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 3.0e-176 622.1 406 75.6
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 1.9e-175 619.4 407 76.4
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 5.6e-175 617.8 404 75.2
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 3.6e-174 615.1 381 77.7
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 4.8e-174 614.8 398 76.6
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 8.1e-174 614.0 396 75.5
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 1.4e-173 613.2 397 75.8
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 5.3e-173 611.3 403 75.4
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 1.2e-172 610.1 403 75.9
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 1.5e-172 609.8 401 75.3
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 3.4e-172 608.6 402 75.1
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 5.8e-172 607.8 402 75.1
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 1.3e-171 606.7 397 74.8
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 1.3e-171 606.7 400 75.0
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 1.7e-171 606.3 398 76.9
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.4e-170 603.2 397 74.8
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.9e-170 602.8 397 74.8
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 2.4e-170 602.4 388 76.0
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 2.4e-170 602.4 398 74.6
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 2.4e-170 602.4 389 77.6
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 3.2e-170 602.1 401 74.1
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 3.2e-170 602.1 401 75.6
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 5.4e-170 601.3 399 75.2
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 7.1e-170 600.9 402 74.4
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 9.3e-170 600.5 399 74.9
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 9.3e-170 600.5 392 76.8
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 1.2e-169 600.1 402 74.6
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 6.0e-169 597.8 398 73.4
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 7.9e-169 597.4 402 73.9
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 1.3e-168 596.7 405 74.1
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 1.3e-168 596.7 396 76.0
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 3.9e-168 595.1 393 76.8
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 5.1e-168 594.7 463 69.1
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 3.3e-167 592.0 393 74.6
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 4.3e-167 591.7 423 70.7
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 9.6e-167 590.5 403 73.7
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 8.1e-166 587.4 402 72.6
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 3.1e-165 585.5 401 72.6
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 5.3e-165 584.7 388 75.5
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 5.3e-165 584.7 406 72.9
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 1.5e-164 583.2 398 74.4
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 3.4e-164 582.0 402 71.1
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 5.8e-164 581.3 383 74.9
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 7.6e-164 580.9 403 72.2
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 7.6e-164 580.9 396 73.2
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 1.7e-163 579.7 396 73.0
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 1.7e-163 579.7 396 73.0
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 2.2e-163 579.3 365 78.9
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 4.9e-163 578.2 350 79.1
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 8.4e-163 577.4 399 72.7
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 1.9e-162 576.2 396 72.2
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.9e-162 576.2 365 77.0
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 1.9e-162 576.2 398 71.6
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 2.5e-162 575.9 391 72.9
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 2.5e-162 575.9 424 70.8
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 3.2e-162 575.5 415 70.1
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 4.2e-162 575.1 350 78.9
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 5.5e-162 574.7 391 72.6
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 9.3e-162 573.9 379 74.1
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 2.1e-161 572.8 378 75.7
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 2.7e-161 572.4 378 75.4
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 6.0e-161 571.2 347 79.8
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 1.0e-160 570.5 378 75.4
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 5.1e-160 568.2 388 72.7
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 5.1e-160 568.2 402 71.9
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 5.1e-160 568.2 397 71.0
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 6.7e-160 567.8 393 70.5
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 8.7e-160 567.4 399 70.7
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 1.1e-159 567.0 397 70.3
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 3.3e-159 565.5 383 71.8
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 4.3e-159 565.1 573 56.0
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 4.3e-159 565.1 406 70.2
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 5.6e-159 564.7 347 77.5
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 5.6e-159 564.7 396 72.2
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 7.4e-159 564.3 397 69.8
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 9.6e-159 563.9 399 70.7
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 1.3e-158 563.5 355 74.9
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 1.6e-158 563.1 314 86.3
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 6.2e-158 561.2 397 70.8
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 1.4e-157 560.1 327 82.0
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 1.4e-157 560.1 347 76.1
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 4.0e-157 558.5 347 76.7
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 2.6e-156 555.8 385 73.0
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 2.6e-156 555.8 397 70.0
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 2.6e-156 555.8 397 68.5
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 1.3e-155 553.5 426 67.6
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 1.7e-155 553.1 371 73.0
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 2.9e-155 552.4 385 72.5
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 2.9e-155 552.4 368 73.1
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 8.4e-155 550.8 366 74.0
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 1.4e-154 550.1 360 74.4
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 1.9e-154 549.7 369 74.0
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 1.2e-153 547.0 368 73.4
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 2.7e-153 545.8 364 72.8
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 3.3e-151 538.9 354 74.9
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 9.7e-151 537.3 392 67.9
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 2.8e-150 535.8 378 72.2
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 1.8e-149 533.1 393 68.4
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 6.9e-149 531.2 370 71.4
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 1.3e-147 526.9 382 69.4
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 2.2e-147 526.2 398 67.1
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 2.1e-145 519.6 399 67.4
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 6.7e-144 514.6 314 78.7
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 2.0e-143 513.1 399 65.2
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 1.7e-142 510.0 364 67.9
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 3.7e-142 508.8 398 65.8
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 8.2e-142 507.7 387 67.4
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 6.9e-141 504.6 387 66.9
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 1.7e-131 473.4 292 78.1
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 1.0e-128 464.2 372 62.1
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 1.1e-122 444.1 350 63.1
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 3.1e-117 426.0 286 73.1
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.4e-112 410.6 381 58.8
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 7.8e-76 288.5 194 74.7
Cpa.g.sc62.58 Carica papaya HOM05D005562 ORTHO05D007785 1.0e-67 261.5 147 81.0
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 4.8e-65 252.7 374 42.2
HanXRQChr10g0318401 Helianthus annuus HOM05D005562 ORTHO05D007785 1.0e-59 235.0 171 63.7
DCAR_021731 Daucus carota HOM05D005562 ORTHO05D007785 1.1e-58 231.5 324 46.6
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 2.0e-55 220.7 187 62.6
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 3.2e-53 213.4 170 64.7
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 8.4e-46 188.7 112 82.1
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 1.0e-38 165.2 112 71.4
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 6.9e-32 142.5 81 80.2
Cfa027024 Carpinus fangiana HOM05D005562 ORTHO05D121372 3.8e-30 136.7 398 29.6
Actinidia17845 Actinidia chinensis HOM05D005562 ORTHO05D030745 1.1e-29 135.2 136 55.1
SEGI_28239 Sequoiadendron giganteum HOM05D005562 ORTHO05D007785 1.1e-24 118.6 83 68.7
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 1.8e-16 91.3 54 77.8
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 7.2e-13 79.3 93 49.5
EL10Ac8g18875 Beta vulgaris HOM05D000028 ORTHO05D003251 9.4e-13 79.0 47 83.0
Glyma.08G079000 Glycine max HOM05D005562 ORTHO05D007785 5.7e-10 69.7 45 64.4
Glyma.08G079050 Glycine max HOM05D005562 ORTHO05D213306 1.4e-08 65.1 50 66.0


User provided reference genes

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