Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 1.4e-87 326.2 170 100.0
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 3.3e-76 288.5 158 95.6
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 4.4e-76 288.1 158 95.6
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.0e-53 213.8 169 71.6
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 3.3e-39 165.6 175 59.4
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 4.7e-38 161.8 175 61.7
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 4.7e-38 161.8 175 61.7
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 2.3e-37 159.5 175 58.9
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 8.9e-37 157.5 181 58.0
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.5e-36 156.8 182 54.9
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 2.0e-36 156.4 186 56.5
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 3.4e-36 155.6 178 58.4
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 5.8e-36 154.8 178 53.9
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 7.5e-36 154.5 182 52.7
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.3e-35 153.7 183 58.5
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 2.2e-35 152.9 181 58.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 8.3e-35 151.0 182 53.3
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 8.3e-35 151.0 180 53.3
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 3.2e-34 149.1 175 56.0
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 2.7e-33 146.0 177 54.8
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 3.5e-33 145.6 172 55.2
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.3e-32 143.7 172 54.7
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 1.3e-32 143.7 171 56.1
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.3e-32 143.7 178 53.4
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.3e-32 143.7 178 54.5
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.0e-32 142.5 172 51.2
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 3.0e-32 142.5 172 53.5
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.1e-32 141.7 171 53.8
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.1e-32 141.7 171 53.8
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 5.1e-32 141.7 178 53.9
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 8.6e-32 141.0 151 57.6
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.5e-31 140.2 178 50.6
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.9e-31 139.8 171 53.2
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 5.6e-31 138.3 172 52.9
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 7.3e-31 137.9 155 58.1
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.2e-30 137.1 169 55.0
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.6e-30 136.7 173 52.6
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 1.6e-30 136.7 173 54.3
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.6e-30 136.7 171 52.6
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.1e-30 136.3 183 50.8
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 2.1e-30 136.3 155 57.4
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.2e-30 134.8 121 66.1
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.1e-29 134.0 132 62.1
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.1e-29 134.0 172 50.6
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 1.8e-29 133.3 179 52.0
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.8e-29 133.3 172 56.4
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 3.1e-29 132.5 170 52.4
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 4.0e-29 132.1 175 53.1
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 6.8e-29 131.3 132 61.4
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 8.9e-29 131.0 196 51.0
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 2.0e-28 129.8 152 54.6
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 2.6e-28 129.4 122 63.1
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 3.4e-28 129.0 172 52.9
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 5.8e-28 128.3 170 49.4
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 5.8e-28 128.3 172 53.5
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 5.8e-28 128.3 99 73.7
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 9.9e-28 127.5 129 62.0
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 9.9e-28 127.5 174 48.9
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 9.9e-28 127.5 167 51.5
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.3e-27 127.1 180 51.1
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.7e-27 126.7 177 52.0
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.2e-27 126.3 172 49.4
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 2.9e-27 125.9 181 49.7
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 2.9e-27 125.9 88 77.3
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 6.4e-27 124.8 171 49.7
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 1.1e-26 124.0 143 56.6
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.4e-26 123.6 176 51.7
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.9e-26 123.2 86 75.6
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.9e-26 123.2 177 50.8
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.9e-26 123.2 139 55.4
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 4.1e-26 122.1 175 48.6
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 4.1e-26 122.1 171 52.0
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 5.4e-26 121.7 86 74.4
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 5.4e-26 121.7 86 74.4
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 5.4e-26 121.7 86 75.6
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 7.1e-26 121.3 137 58.4
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 9.2e-26 120.9 94 71.3
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 9.2e-26 120.9 94 71.3
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 9.2e-26 120.9 86 73.3
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 9.2e-26 120.9 182 51.1
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 9.2e-26 120.9 140 52.9
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.2e-25 120.6 123 59.3
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.2e-25 120.6 123 59.3
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.6e-25 120.2 109 63.3
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 1.6e-25 120.2 153 52.3
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 4.6e-25 118.6 86 75.6
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.6e-25 118.6 160 53.8
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 6.0e-25 118.2 160 53.8
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 7.8e-25 117.9 113 65.5
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.3e-24 117.1 177 49.7
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.7e-24 116.7 137 57.7
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 3.9e-24 115.5 170 50.0
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 1.9e-23 113.2 172 47.1
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.9e-23 113.2 172 47.1
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.9e-23 113.2 158 48.7
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 2.5e-23 112.8 162 50.0
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.3e-23 112.5 171 45.6
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 3.3e-23 112.5 106 63.2
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 9.6e-23 110.9 80 73.8
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.2e-22 110.5 117 59.8
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.2e-22 110.5 117 59.8
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.1e-22 109.8 117 59.8
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 4.7e-22 108.6 168 47.6
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 6.2e-22 108.2 163 47.2
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 8.1e-22 107.8 105 61.9
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 1.8e-21 106.7 97 58.8
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 3.1e-21 105.9 137 54.7
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 5.8e-20 101.7 95 58.9
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 9.9e-20 100.9 83 67.5
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 9.9e-20 100.9 83 65.1
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 1.1e-15 87.4 84 56.0
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.5e-15 87.0 64 71.9
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 3.3e-15 85.9 60 73.3
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 2.4e-13 79.7 80 53.8
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.0e-12 76.6 87 50.6
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 7.6e-12 74.7 87 49.4
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 8.4e-11 71.2 84 51.2


User provided reference genes

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