Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 0.0e+00 1317.0 674 100.0
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 2.4e-133 480.3 258 98.4
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 3.0e-75 287.3 158 95.6
EL10Ac9g21786 Beta vulgaris HOM05D008976 ORTHO05D011121 2.4e-48 198.0 231 52.8
EL10Ac5g11650 Beta vulgaris HOM05D008976 ORTHO05D011121 3.1e-48 197.6 253 48.6
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 2.6e-47 194.5 157 70.7
EL10Ac4g09899 Beta vulgaris HOM05D008976 ORTHO05D011121 4.0e-40 170.6 234 46.2
EL10Ac1g02070 Beta vulgaris HOM05D008976 ORTHO05D011121 2.2e-38 164.9 237 45.6
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 6.0e-36 156.8 165 60.0
EL10Ac6g15678 Beta vulgaris HOM05D008976 ORTHO05D011121 1.0e-35 156.0 122 63.1
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 3.0e-35 154.5 179 55.9
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 3.0e-35 154.5 179 55.9
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 3.3e-34 151.0 164 56.7
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 5.6e-34 150.2 171 59.6
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 5.6e-34 150.2 163 60.1
EL10Ac6g14951 Beta vulgaris HOM05D008976 ORTHO05D011121 9.6e-34 149.4 242 42.6
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.4e-32 145.6 152 60.5
EL10Ac2g04522 Beta vulgaris HOM05D008976 ORTHO05D011121 1.8e-32 145.2 246 43.5
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.4e-32 144.8 180 53.3
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 4.0e-32 144.1 171 57.9
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 9.0e-32 142.9 222 44.6
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 9.0e-32 142.9 130 66.2
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.2e-31 142.5 180 53.9
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.0e-31 141.7 174 53.4
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.6e-31 141.4 151 58.3
EL10Ac1g01107 Beta vulgaris HOM05D008976 ORTHO05D011121 3.4e-31 141.0 240 42.9
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 7.6e-31 139.8 170 51.8
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.0e-30 139.4 178 51.1
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 1.3e-30 139.0 167 54.5
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-30 138.3 168 52.4
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-30 138.3 168 52.4
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 2.2e-30 138.3 162 54.9
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.8e-30 137.5 178 48.9
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 4.9e-30 137.1 165 55.2
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 4.9e-30 137.1 172 52.9
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.1e-29 136.0 155 57.4
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.1e-29 136.0 168 54.8
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.5e-29 134.8 162 54.3
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 3.2e-29 134.4 155 56.8
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 5.5e-29 133.7 165 55.2
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.6e-28 132.1 97 75.3
EL10Ac2g04471 Beta vulgaris HOM05D008976 ORTHO05D011121 1.6e-28 132.1 246 40.2
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 1.6e-28 132.1 167 53.3
EL10Ac5g10790 Beta vulgaris HOM05D008976 ORTHO05D011121 2.7e-28 131.3 230 39.6
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 3.5e-28 131.0 159 55.3
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 4.6e-28 130.6 161 52.2
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 4.6e-28 130.6 157 55.4
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 6.0e-28 130.2 160 49.4
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 6.0e-28 130.2 178 51.7
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 6.0e-28 130.2 168 53.0
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 7.9e-28 129.8 97 74.2
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 1.8e-27 128.6 183 48.6
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 1.8e-27 128.6 122 63.1
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.8e-27 128.6 121 64.5
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.0e-27 127.9 148 53.4
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 3.0e-27 127.9 152 54.6
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 3.0e-27 127.9 160 52.5
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 3.9e-27 127.5 139 61.9
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 8.7e-27 126.3 156 57.1
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.1e-26 125.9 162 50.6
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.9e-26 125.2 123 62.6
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.9e-26 125.2 99 72.7
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 2.5e-26 124.8 171 52.0
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.3e-26 124.4 148 57.4
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 3.3e-26 124.4 162 53.1
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 4.3e-26 124.0 183 49.2
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 7.4e-26 123.2 148 53.4
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 9.6e-26 122.9 123 61.0
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 9.6e-26 122.9 162 50.0
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.3e-25 122.5 162 50.0
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.6e-25 122.1 166 53.6
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 2.1e-25 121.7 136 55.9
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 2.8e-25 121.3 160 50.0
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.8e-25 121.3 143 55.9
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 2.8e-25 121.3 137 58.4
EL10Ac3g06622 Beta vulgaris HOM05D008976 ORTHO05D011121 3.7e-25 120.9 274 33.2
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 3.7e-25 120.9 139 54.7
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 4.8e-25 120.6 86 74.4
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 4.8e-25 120.6 137 58.4
EL10Ac1g01670 Beta vulgaris HOM05D008976 ORTHO05D011121 8.2e-25 119.8 205 40.0
EL10Ac1g01108 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-24 119.4 119 52.9
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.1e-24 119.4 94 71.3
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.4e-24 119.0 109 63.3
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.4e-24 119.0 86 73.3
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.4e-24 119.0 86 73.3
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.4e-24 119.0 163 49.1
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.4e-24 119.0 86 74.4
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.8e-24 118.6 165 52.1
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 2.4e-24 118.2 86 72.1
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 3.1e-24 117.9 124 57.3
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 3.1e-24 117.9 124 57.3
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 3.1e-24 117.9 126 61.1
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 4.1e-24 117.5 152 53.3
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.1e-24 117.5 155 55.5
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 5.3e-24 117.1 166 51.2
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 5.3e-24 117.1 155 55.5
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 9.0e-24 116.3 158 50.0
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 9.0e-24 116.3 140 52.1
EL10Ac8g18673 Beta vulgaris HOM05D008976 ORTHO05D011121 1.2e-23 115.9 124 50.0
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.2e-23 115.9 143 52.4
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.2e-23 115.9 86 74.4
EL10Ac6g15260 Beta vulgaris HOM05D008976 ORTHO05D011121 1.5e-23 115.5 124 50.0
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.5e-23 115.5 155 51.6
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 3.4e-23 114.4 156 52.6
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 4.5e-23 114.0 137 56.2
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 4.5e-23 114.0 154 50.0
EL10Ac1g00211 Beta vulgaris HOM05D008976 ORTHO05D011121 5.8e-23 113.6 124 49.2
EL10Ac5g12917 Beta vulgaris HOM05D008976 ORTHO05D011121 5.8e-23 113.6 308 31.2
EL10Ac6g13580 Beta vulgaris HOM05D008976 ORTHO05D011121 5.8e-23 113.6 308 31.2
EL10Ac2g02786 Beta vulgaris HOM05D008976 ORTHO05D011121 1.3e-22 112.5 82 72.0
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 1.7e-22 112.1 89 73.0
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 1.7e-22 112.1 137 55.5
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.2e-22 111.7 166 50.6
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 3.8e-22 110.9 80 75.0
EL10Ac4g09474 Beta vulgaris HOM05D000886 ORTHO05D000525 3.8e-22 110.9 211 37.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 3.8e-22 110.9 118 60.2
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.8e-22 110.9 118 60.2
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 3.8e-22 110.9 106 63.2
EL10Ac7g16632 Beta vulgaris HOM05D008976 ORTHO05D011121 5.0e-22 110.5 249 33.3
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 6.5e-22 110.2 81 71.6
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.4e-21 109.0 116 56.9
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.9e-21 108.6 168 44.0
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.9e-21 108.6 116 57.8
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.9e-21 108.6 116 57.8
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.2e-21 107.8 116 57.8
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 4.2e-21 107.5 105 62.9
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 9.3e-21 106.3 137 54.7
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 1.2e-20 105.9 97 59.8
EL10Ac2g04475 Beta vulgaris HOM05D008976 ORTHO05D011121 1.3e-19 102.4 108 51.9
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 2.3e-19 101.7 83 66.3
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 6.7e-19 100.1 95 58.9
EL10Ac8g18738 Beta vulgaris HOM05D008976 ORTHO05D011121 6.7e-19 100.1 173 40.5
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 1.1e-18 99.4 83 67.5
EL10Ac4g08137 Beta vulgaris HOM05D008976 ORTHO05D011121 3.3e-18 97.8 179 39.7
EL10Ac4g10257 Beta vulgaris HOM05D008976 ORTHO05D011121 3.3e-18 97.8 134 45.5
EL10Ac3g05379 Beta vulgaris HOM05D008976 ORTHO05D011121 5.7e-18 97.1 123 46.3
EL10Ac7g17245 Beta vulgaris HOM05D008976 ORTHO05D011121 1.6e-17 95.5 110 48.2
EL10Ac4g09831 Beta vulgaris HOM05D008976 ORTHO05D011121 6.3e-17 93.6 121 46.3
EL10Ac8g19650 Beta vulgaris HOM05D000992 ORTHO05D006704 1.4e-16 92.4 104 44.2
EL10Ac2g02473 Beta vulgaris HOM05D008976 ORTHO05D011121 1.5e-15 89.0 104 47.1
EL10Ac7g17991 Beta vulgaris HOM05D008976 ORTHO05D011121 2.6e-15 88.2 152 38.2
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 4.5e-15 87.4 64 71.9
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 5.9e-15 87.0 60 75.0
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 1.7e-14 85.5 120 45.0
EL10Ac5g12223 Beta vulgaris HOM05D008976 ORTHO05D011121 2.2e-14 85.1 100 50.0
EL10Ac1g00331 Beta vulgaris HOM05D008976 ORTHO05D011121 3.8e-14 84.3 234 29.9
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 9.4e-13 79.7 80 55.0
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.8e-11 75.5 113 44.2
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.1e-11 73.9 87 49.4
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 2.5e-10 71.6 84 51.2


User provided reference genes

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