Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 2.0e-89 332.4 169 100.0
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 1.9e-71 272.7 169 82.8
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 5.1e-69 264.6 169 81.7
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 2.5e-63 245.7 169 76.3
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 1.2e-49 200.3 174 60.9
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 4.0e-37 158.7 148 56.8
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 2.0e-36 156.4 136 59.6
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 2.6e-36 156.0 136 58.8
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 4.4e-36 155.2 145 57.2
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 4.4e-36 155.2 146 55.5
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 4.4e-36 155.2 140 57.1
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 5.7e-36 154.8 166 51.8
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 5.7e-36 154.8 133 60.9
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 1.7e-35 153.3 131 58.0
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 1.7e-35 153.3 149 53.7
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 3.7e-35 152.1 128 62.5
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 4.9e-35 151.8 146 54.8
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 6.3e-35 151.4 131 55.0
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 6.3e-35 151.4 147 54.4
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 6.3e-35 151.4 139 59.7
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 5.4e-34 148.3 131 58.8
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 5.4e-34 148.3 124 62.9
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 7.0e-34 147.9 147 54.4
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 7.0e-34 147.9 119 64.7
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 1.2e-33 147.1 147 53.7
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 1.2e-33 147.1 159 54.1
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 1.6e-33 146.7 146 52.7
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 3.5e-33 145.6 147 54.4
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 3.5e-33 145.6 133 54.9
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 5.9e-33 144.8 133 54.1
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 7.8e-33 144.4 133 54.1
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 1.0e-32 144.1 133 57.1
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 2.3e-32 142.9 140 52.9
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 2.3e-32 142.9 113 65.5
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 2.9e-32 142.5 122 59.8
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 3.9e-32 142.1 121 58.7
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 5.0e-32 141.7 122 59.8
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 5.0e-32 141.7 128 57.8
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 8.6e-32 141.0 143 51.7
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 1.1e-31 140.6 134 59.7
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 1.5e-31 140.2 129 58.1
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 1.5e-31 140.2 125 53.6
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 1.9e-31 139.8 117 63.2
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 1.9e-31 139.8 129 58.1
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 1.9e-31 139.8 126 58.7
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 2.5e-31 139.4 132 56.8
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 3.3e-31 139.0 135 56.3
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 3.3e-31 139.0 144 52.1
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 4.3e-31 138.7 122 58.2
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 2.1e-30 136.3 126 54.8
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 2.1e-30 136.3 145 52.4
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 2.8e-30 136.0 120 58.3
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 2.8e-30 136.0 132 55.3
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 2.8e-30 136.0 133 56.4
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 3.6e-30 135.6 125 56.8
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 6.1e-30 134.8 125 57.6
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 6.1e-30 134.8 125 56.0
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 1.4e-29 133.7 117 60.7
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 3.1e-29 132.5 150 50.7
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 5.2e-29 131.7 148 50.0
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 6.8e-29 131.3 127 56.7
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 1.2e-28 130.6 125 57.6
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 1.2e-28 130.6 146 48.6
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 2.6e-28 129.4 149 47.0
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 7.5e-28 127.9 137 48.9
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 1.3e-27 127.1 118 53.4
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 1.7e-27 126.7 139 51.8
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 2.9e-27 125.9 118 52.5
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 3.7e-27 125.6 128 55.5
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 4.9e-27 125.2 123 47.2
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 6.4e-27 124.8 120 50.8
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 6.4e-27 124.8 120 50.8
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 8.3e-27 124.4 145 50.3
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 8.3e-27 124.4 121 52.9
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 1.4e-26 123.6 106 54.7
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 2.4e-26 122.9 125 54.4
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 4.1e-26 122.1 115 56.5
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 5.4e-26 121.7 115 52.2
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 9.2e-26 120.9 134 50.0
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 1.6e-25 120.2 108 52.8
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 2.0e-25 119.8 121 49.6
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 2.7e-25 119.4 109 51.4
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 3.5e-25 119.0 136 49.3
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 3.5e-25 119.0 121 48.8
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 6.0e-25 118.2 118 50.8
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 7.8e-25 117.9 134 45.5
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 1.0e-24 117.5 121 48.8
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 3.0e-24 115.9 127 50.4
Oeu056130.2 Olea europaea HOM05D000966 ORTHO05D007323 6.6e-24 114.8 114 50.9
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 8.6e-24 114.4 120 50.8
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 1.5e-23 113.6 125 52.0
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 3.3e-23 112.5 132 50.0
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 7.3e-23 111.3 107 49.5
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 1.2e-22 110.5 200 37.0
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 3.6e-22 109.0 121 47.1
GSVIVG01034571001 Vitis vinifera HOM05D000966 ORTHO05D007323 4.7e-22 108.6 124 47.6
Cc03_g11990 Coffea canephora HOM05D000966 ORTHO05D007323 6.2e-22 108.2 118 45.8
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 6.2e-22 108.2 100 52.0
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 8.0e-22 107.8 128 46.9
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 1.8e-21 106.7 144 45.1
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 3.7e-19 99.0 82 57.3
Cc00_g32880 Coffea canephora HOM05D000966 ORTHO05D007323 1.2e-17 94.0 93 47.3
Rhsim06G0128000 Rhododendron simsii HOM05D000966 ORTHO05D007323 2.1e-17 93.2 72 62.5
SEGI_26212 Sequoiadendron giganteum HOM05D000966 ORTHO05D007323 2.5e-15 86.3 94 43.6
Medtr1g098030 Medicago truncatula HOM05D000966 ORTHO05D007323 9.5e-15 84.3 61 73.8
Cc03_g12000 Coffea canephora HOM05D000966 ORTHO05D007323 1.2e-12 77.4 188 31.4
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 1.1e-07 60.8 49 57.1


User provided reference genes

Program Settings