Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 0.0e+00 1281.2 625 100.0
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 4.7e-269 931.0 539 82.7
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 1.1e-236 823.5 537 72.8
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 4.6e-224 781.6 539 67.9
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 1.0e-223 780.4 543 68.0
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 1.3e-223 780.0 500 72.6
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 2.5e-222 775.8 543 67.6
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 7.4e-222 774.2 536 68.8
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 2.2e-221 772.7 514 70.2
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 6.3e-221 771.2 536 69.6
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 2.4e-220 769.2 503 70.8
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 3.1e-220 768.8 540 68.0
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 9.0e-220 767.3 508 70.5
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 1.2e-219 766.9 539 67.0
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 1.5e-219 766.5 542 66.8
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 1.5e-219 766.5 539 68.3
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.0e-219 766.1 542 66.6
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 5.9e-219 764.6 535 68.0
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 2.9e-218 762.3 534 69.3
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 5.0e-218 761.5 541 66.9
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 1.4e-217 760.0 537 67.0
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 1.9e-217 759.6 525 67.6
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.5e-217 759.2 549 65.8
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 3.2e-217 758.8 502 70.9
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 9.3e-217 757.3 543 67.4
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 2.7e-216 755.7 535 66.9
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 2.7e-216 755.7 535 66.9
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 1.8e-215 753.1 538 66.5
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 3.9e-215 751.9 510 68.8
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 5.7e-214 748.0 550 65.8
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 7.4e-214 747.7 534 66.9
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 9.7e-214 747.3 516 67.6
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 2.8e-213 745.7 508 69.1
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 3.7e-213 745.3 534 64.8
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 6.3e-213 744.6 556 64.7
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 1.1e-212 743.8 537 66.1
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 1.1e-212 743.8 534 64.8
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 1.4e-212 743.4 541 67.1
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 1.4e-212 743.4 497 69.2
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 2.4e-212 742.7 541 67.3
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 2.4e-212 742.7 539 66.0
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 2.0e-211 739.6 541 67.1
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 3.4e-211 738.8 540 67.2
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 3.4e-211 738.8 535 64.7
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 3.4e-211 738.8 536 66.8
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 3.4e-211 738.8 504 68.8
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 5.9e-211 738.0 546 65.4
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 7.7e-211 737.6 502 68.5
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 2.9e-210 735.7 542 66.1
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 1.1e-209 733.8 603 62.0
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 3.2e-209 732.3 519 67.8
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 9.4e-209 730.7 533 65.5
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 1.2e-208 730.3 521 67.2
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 1.2e-208 730.3 542 64.6
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 3.6e-208 728.8 541 66.2
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 6.1e-208 728.0 490 69.6
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 1.8e-207 726.5 515 66.6
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 3.9e-207 725.3 489 71.4
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 8.8e-207 724.2 503 67.8
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 1.1e-206 723.8 529 64.5
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 1.3e-205 720.3 539 64.0
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 2.8e-205 719.2 555 62.2
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 3.7e-205 718.8 504 67.3
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 8.2e-205 717.6 538 64.5
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 5.3e-204 714.9 502 67.1
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 1.5e-203 713.4 541 64.1
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 2.0e-203 713.0 488 68.9
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 3.4e-203 712.2 533 63.4
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 9.4e-201 704.1 517 65.2
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 1.8e-199 699.9 535 63.0
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 2.0e-198 696.4 508 66.3
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 5.7e-198 694.9 543 63.0
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 1.7e-197 693.3 505 65.5
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 1.4e-196 690.3 533 62.5
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 5.3e-196 688.3 522 64.4
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 5.9e-195 684.9 509 65.2
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 1.3e-194 683.7 513 64.9
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 3.8e-194 682.2 522 62.6
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 1.1e-193 680.6 515 64.1
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 9.4e-193 677.6 513 63.9
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 3.0e-191 672.5 535 60.4
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 3.0e-191 672.5 459 69.7
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 3.3e-190 669.1 518 62.4
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 5.7e-190 668.3 476 66.8
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 7.5e-190 667.9 504 64.5
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 5.0e-186 655.2 462 67.3
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 6.5e-186 654.8 513 63.0
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 1.5e-185 653.7 493 64.1
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 3.4e-182 642.5 419 73.0
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 7.5e-174 614.8 493 62.1
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 5.0e-170 602.1 429 66.9
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 8.6e-170 601.3 503 60.0
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 4.3e-169 599.0 415 69.9
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 3.0e-167 592.8 523 54.7
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 2.0e-158 563.5 419 64.9
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 1.4e-156 557.4 477 54.7
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 9.2e-156 554.7 378 68.8
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 1.6e-155 553.9 397 65.5
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 2.3e-154 550.1 570 48.9
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 2.3e-154 550.1 570 48.9
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 8.6e-154 548.1 375 68.3
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 1.2e-152 544.3 440 61.4
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 2.5e-145 520.0 381 68.2
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 1.6e-139 500.7 343 68.8
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 5.6e-137 492.3 373 63.8
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.4e-135 486.9 490 54.5
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 3.1e-135 486.5 537 49.2
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 1.3e-130 471.1 487 51.7
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 9.9e-126 454.9 508 51.0
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 1.1e-121 441.4 432 53.2
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 6.7e-114 415.6 281 70.5
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 6.1e-91 339.3 457 42.0
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 2.0e-81 307.8 250 62.8
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.1e-79 302.0 238 62.2
Glyma.17G068567 Glycine max HOM05D005919 ORTHO05D007176 4.2e-68 263.5 189 66.7
AUR62026693 Chenopodium quinoa HOM05D005919 ORTHO05D007176 3.8e-61 240.4 153 73.9
arahy.Tifrunner.gnm1.ann1.8I3VMK Arachis hypogaea HOM05D005919 ORTHO05D007176 9.5e-60 235.7 201 60.2
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 1.2e-49 202.2 160 63.1
Sabra18G0085400 Salix brachista HOM05D005919 ORTHO05D007176 4.1e-47 193.7 138 63.0
Actinidia20955 Actinidia chinensis HOM05D005919 ORTHO05D007176 1.2e-46 192.2 126 68.3
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 7.3e-44 183.0 497 30.2
CDE02G3325 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 1.8e-42 178.3 121 62.8
Psat4g010400 Pisum sativum HOM05D005919 ORTHO05D007176 3.1e-42 177.6 145 60.0
GSVIVG01023746001 Vitis vinifera HOM05D005919 ORTHO05D007176 1.0e-29 136.0 89 66.3
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 1.7e-29 135.2 133 54.9
Zm00001eb050560 Zea mays HOM05D005919 ORTHO05D007176 2.1e-27 128.3 107 59.8
Zm00001eb260780 Zea mays HOM05D005919 ORTHO05D007176 2.1e-27 128.3 107 59.8
Zm00001eb302550 Zea mays HOM05D005919 ORTHO05D007176 2.1e-27 128.3 107 59.8
Actinidia15384 Actinidia chinensis HOM05D005919 ORTHO05D007176 4.9e-24 117.1 87 65.5
Rhsim01G0011300 Rhododendron simsii HOM05D005919 ORTHO05D007176 1.9e-20 105.1 75 61.3
AL1G16380 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 4.3e-20 104.0 81 61.7
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 1.2e-09 69.3 301 26.6
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 1.5e-09 68.9 320 27.2
SMO145G0125 Selaginella moellendorffii HOM05D009274 ORTHO05D011512 1.5e-09 68.9 293 25.9
Psat4g048040 Pisum sativum HOM05D005919 ORTHO05D007176 4.5e-09 67.4 42 64.3
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 4.5e-09 67.4 301 27.6
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 7.6e-09 66.6 320 26.2
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 9.9e-09 66.2 321 25.5
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.3e-08 65.9 301 27.2
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 2.9e-08 64.7 322 26.7
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 4.9e-08 63.9 247 25.9
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 6.4e-08 63.5 211 28.4
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 6.4e-08 63.5 321 24.6
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 8.4e-08 63.2 417 23.7
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.1e-07 62.8 210 26.7
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 1.9e-07 62.0 210 26.7
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 2.4e-07 61.6 417 23.7
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 2.4e-07 61.6 286 22.7
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 2.4e-07 61.6 330 26.1
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 4.2e-07 60.8 318 26.7
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 5.4e-07 60.5 231 26.8
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 7.1e-07 60.1 318 22.6
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 9.3e-07 59.7 221 24.4
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 1.2e-06 59.3 267 24.0
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.1e-06 58.5 320 24.4
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 2.1e-06 58.5 272 24.3
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 2.1e-06 58.5 266 22.2
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 4.6e-06 57.4 282 22.0
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 4.6e-06 57.4 209 24.4
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 6.0e-06 57.0 307 26.4
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 7.9e-06 56.6 301 24.9
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 7.9e-06 56.6 210 26.2


User provided reference genes

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