Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 2.0e-121 439.1 222 100.0
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 5.9e-81 304.7 238 68.9
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.4e-77 293.5 190 76.8
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 7.0e-58 228.0 194 61.3
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 9.2e-58 227.6 242 54.5
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 8.6e-56 221.1 253 54.2
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.0e-53 212.6 192 59.4
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.9e-51 206.1 190 56.8
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.3e-51 204.5 192 57.8
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 1.1e-50 204.1 183 57.9
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.4e-50 203.8 195 55.9
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 5.4e-50 201.8 231 51.5
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 9.2e-50 201.1 195 54.4
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 1.6e-49 200.3 202 55.0
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 2.0e-49 199.9 195 56.4
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 3.5e-49 199.1 225 50.7
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 4.6e-49 198.7 231 50.6
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 5.9e-49 198.4 195 52.8
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.0e-48 197.6 204 52.9
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.0e-48 197.6 235 49.8
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.3e-48 197.2 191 51.3
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 3.0e-48 196.1 198 56.6
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 3.9e-48 195.7 226 50.9
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 6.6e-48 194.9 233 51.5
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 1.9e-47 193.4 191 52.9
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.9e-47 193.4 203 50.7
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 2.5e-47 193.0 212 53.8
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.3e-47 192.6 195 52.8
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 3.3e-47 192.6 199 52.3
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.3e-47 191.4 198 53.0
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 2.1e-46 189.9 196 52.6
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.8e-46 189.5 198 53.0
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 2.8e-46 189.5 232 49.1
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 6.2e-46 188.3 186 55.4
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 6.2e-46 188.3 198 52.5
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 6.2e-46 188.3 190 52.1
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 1.0e-45 187.6 193 53.4
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 1.8e-45 186.8 233 46.4
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 3.1e-45 186.0 192 51.0
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 4.0e-45 185.7 203 50.2
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.2e-45 185.3 204 52.0
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 5.2e-45 185.3 189 51.9
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 5.2e-45 185.3 229 48.5
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 8.9e-45 184.5 204 52.0
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 8.9e-45 184.5 204 52.0
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.2e-44 184.1 202 51.0
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.5e-44 183.7 196 52.0
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.0e-44 183.3 204 51.5
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 2.0e-44 183.3 191 50.8
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 2.0e-44 183.3 188 51.1
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.4e-44 182.2 204 50.5
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 4.4e-44 182.2 176 54.5
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 7.5e-44 181.4 192 52.6
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 7.5e-44 181.4 193 50.8
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 9.8e-44 181.0 189 53.4
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.7e-43 180.3 183 51.4
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 2.2e-43 179.9 195 49.2
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 2.2e-43 179.9 190 52.6
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 2.2e-43 179.9 202 51.0
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 3.7e-43 179.1 200 50.0
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 6.4e-43 178.3 197 51.3
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.1e-42 177.6 197 50.8
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.4e-42 177.2 204 48.5
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 3.2e-42 176.0 192 49.0
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 4.1e-42 175.6 191 48.2
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.4e-42 175.3 215 47.9
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.2e-42 174.5 194 48.5
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.2e-41 174.1 189 51.9
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 3.5e-41 172.6 192 51.6
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 6.0e-41 171.8 189 47.6
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 1.0e-40 171.0 195 48.7
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.7e-40 170.2 189 50.3
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 2.3e-40 169.9 194 48.5
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 2.3e-40 169.9 194 48.5
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 3.0e-40 169.5 188 47.9
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 3.9e-40 169.1 193 48.7
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 5.0e-40 168.7 196 49.5
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 1.1e-39 167.5 193 47.7
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.9e-39 166.8 193 48.2
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.9e-39 166.8 210 45.2
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.9e-39 166.8 195 49.2
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.3e-39 166.0 162 54.3
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 3.3e-39 166.0 212 46.2
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 4.3e-39 165.6 205 47.8
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.3e-39 165.6 196 48.0
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 4.3e-39 165.6 265 39.2
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 5.6e-39 165.2 162 54.3
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 7.3e-39 164.9 199 47.7
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 9.5e-39 164.5 201 48.3
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 9.5e-39 164.5 188 46.3
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-38 164.1 234 44.9
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-38 164.1 234 44.9
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 2.1e-38 163.3 244 43.0
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.1e-38 163.3 189 42.3
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 2.8e-38 162.9 200 48.0
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.6e-38 162.5 190 46.3
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 8.1e-38 161.4 191 45.0
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.8e-37 160.2 234 43.2
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 1.8e-37 160.2 186 47.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 2.3e-37 159.8 169 50.3
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 3.1e-37 159.5 169 50.3
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.1e-37 159.5 175 50.3
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 5.2e-37 158.7 169 49.1
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 6.8e-37 158.3 199 45.7
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 8.9e-37 157.9 170 49.4
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 8.9e-37 157.9 170 49.4
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 8.9e-37 157.9 227 44.9
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.2e-36 157.5 196 43.9
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 2.0e-36 156.8 283 38.2
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 5.8e-36 155.2 197 45.7
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.3e-35 154.1 189 47.1
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 2.9e-35 152.9 181 49.2
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 1.4e-34 150.6 191 45.5
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 1.4e-34 150.6 190 46.3
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 4.1e-34 149.1 178 44.9
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 8.6e-32 141.4 157 49.7
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 1.1e-31 141.0 199 43.7
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 4.3e-31 139.0 281 35.6
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 9.5e-31 137.9 190 43.2
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.2e-30 137.5 133 53.4
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.1e-24 115.5 196 41.3
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 2.2e-19 100.1 115 53.0
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 4.9e-19 99.0 118 47.5
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 7.8e-17 91.7 194 33.0
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 8.7e-16 88.2 229 34.5
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.5e-12 75.9 49 73.5
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.6e-09 67.4 73 58.9
AagrBONN_evm.TU.Sc2ySwM_228.3977 Anthoceros agrestis HOM05D024008 ORTHO05D000523 6.7e-08 62.0 145 29.0
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 9.6e-07 58.2 174 28.7
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 4.8e-06 55.8 71 43.7


User provided reference genes

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