Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01539 Beta vulgaris HOM05D014031 ORTHO05D000022 1.6e-134 482.6 231 100.0
EL10Ac3g06853 Beta vulgaris HOM05D014031 ORTHO05D000004 3.0e-43 179.5 108 71.3
EL10Ac4g09742 Beta vulgaris HOM05D014031 ORTHO05D000022 1.9e-37 160.2 228 38.6
EL10Ac2g03536 Beta vulgaris HOM05D014031 ORTHO05D000022 1.2e-36 157.5 117 70.1
EL10Ac2g03336 Beta vulgaris HOM05D014031 ORTHO05D000022 1.1e-34 151.0 90 82.2
EL10Ac1g01517 Beta vulgaris HOM05D014031 ORTHO05D000022 1.3e-27 127.5 72 84.7
EL10Ac4g09006 Beta vulgaris HOM05D014031 ORTHO05D000022 3.2e-21 106.3 321 32.4
Sabra08G0134900 Salix brachista HOM05D000003 ORTHO05D000006 1.1e-18 97.8 204 28.4
EL10Ac4g08169 Beta vulgaris HOM05D000003 ORTHO05D000004 1.2e-15 87.8 93 43.0
EL10Ac9g22480 Beta vulgaris HOM05D014031 ORTHO05D000022 1.1e-13 81.3 93 48.4
Sabra09G0015300 Salix brachista HOM05D000003 ORTHO05D000006 1.6e-12 77.4 268 22.8
AUR62043782 Chenopodium quinoa HOM05D008685 ORTHO05D000022 2.1e-12 77.0 79 46.8
AUR62020106 Chenopodium quinoa HOM05D008685 ORTHO05D000022 3.5e-12 76.3 80 46.2
AUR62034485 Chenopodium quinoa HOM05D008685 ORTHO05D000022 7.9e-12 75.1 108 33.3
PSO210G6361 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-11 73.9 188 24.5
SGA_v2.0_scaffold245G44469 Striga asiatica HOM05D000003 ORTHO05D000022 2.3e-11 73.6 133 30.8
EL10Ac3g06470 Beta vulgaris HOM05D013686 ORTHO05D000022 3.9e-11 72.8 44 81.8
EL10Ac6g13741 Beta vulgaris HOM05D008685 ORTHO05D000022 8.7e-11 71.6 82 46.3
COL.COLO4_08513 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.7e-11 71.6 108 33.3
AUR62034691 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.5e-10 70.9 79 38.0
AUR62042595 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.5e-10 70.9 80 40.0
Sabra10G0111700 Salix brachista HOM05D000003 ORTHO05D000004 1.5e-10 70.9 113 32.7
EL10Ac4g08331 Beta vulgaris HOM05D008685 ORTHO05D000022 2.5e-10 70.1 81 43.2
AUR62013403 Chenopodium quinoa HOM05D008685 ORTHO05D000022 4.3e-10 69.3 82 43.9
AUR62003316 Chenopodium quinoa HOM05D028990 ORTHO05D020420 5.7e-10 68.9 175 25.1
AUR62010817 Chenopodium quinoa HOM05D008685 ORTHO05D000022 5.7e-10 68.9 79 36.7
AUR62011900 Chenopodium quinoa HOM05D008685 ORTHO05D000022 5.7e-10 68.9 79 38.0
AUR62036905 Chenopodium quinoa HOM05D000219 ORTHO05D000226 5.7e-10 68.9 81 35.8
Sabra04G0049100 Salix brachista HOM05D000003 ORTHO05D000007 9.7e-10 68.2 113 31.9
EL10Ac3g06162 Beta vulgaris HOM05D008685 ORTHO05D000022 1.3e-09 67.8 78 42.3
AUR62024214 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.6e-09 67.4 115 31.3
EL10Ac1g02234 Beta vulgaris HOM05D008685 ORTHO05D000022 2.2e-09 67.0 81 43.2
EL10Ac3g05611 Beta vulgaris HOM05D000003 ORTHO05D000022 2.2e-09 67.0 81 40.7
EL10Ac7g16709 Beta vulgaris HOM05D000003 ORTHO05D000004 2.8e-09 66.6 81 42.0
RcHm_v2.0_Chr6g0291741 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-09 66.6 130 27.7
EL10Ac1g02112 Beta vulgaris HOM05D000003 ORTHO05D000006 3.7e-09 66.2 81 43.2
EL10Ac5g11568 Beta vulgaris HOM05D014031 ORTHO05D000022 3.7e-09 66.2 55 67.3
AUR62034456 Chenopodium quinoa HOM05D000091 ORTHO05D001510 3.7e-09 66.2 79 38.0
EL10Ac5g11964 Beta vulgaris HOM05D014031 ORTHO05D000022 4.8e-09 65.9 41 80.5
EL10Ac8g19034 Beta vulgaris HOM05D008685 ORTHO05D000022 8.2e-09 65.1 94 38.3
AUR62042608 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.1e-08 64.7 79 38.0
SHI28675 Sapria himalayana HOM05D004990 ORTHO05D000022 1.1e-08 64.7 102 33.3
AUR62042522 Chenopodium quinoa HOM05D007123 ORTHO05D000233 1.4e-08 64.3 74 43.2
EL10Ac6g14136 Beta vulgaris HOM05D008685 ORTHO05D000022 1.8e-08 63.9 79 41.8
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 3.1e-08 63.2 95 35.8
EL10Ac2g04336 Beta vulgaris HOM05D008685 ORTHO05D000022 4.1e-08 62.8 79 40.5
AUR62042087 Chenopodium quinoa HOM05D008685 ORTHO05D000022 4.1e-08 62.8 78 38.5
SHI53806 Sapria himalayana HOM05D004990 ORTHO05D000022 4.1e-08 62.8 84 35.7
COL.COLO4_10353 Corchorus olitorius HOM05D000003 ORTHO05D000006 5.3e-08 62.4 87 36.8
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 5.3e-08 62.4 81 35.8
CANSAT25G3896 Cannabis sativa HOM05D000003 ORTHO05D000004 6.9e-08 62.0 106 34.9
BcaC04g23343 Brassica carinata HOM05D000003 ORTHO05D001498 9.0e-08 61.6 123 32.5
CANSAT80G1676 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-08 61.6 93 34.4
Peaxi162Scf00422g00049 Petunia axillaris HOM05D005774 ORTHO05D006516 9.0e-08 61.6 79 39.2
BcaC03g14667 Brassica carinata HOM05D000003 ORTHO05D000004 1.2e-07 61.2 70 40.0
SHI43080 Sapria himalayana HOM05D004990 ORTHO05D000022 1.2e-07 61.2 87 31.0
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 1.2e-07 61.2 99 32.3
CANSAT54G1748 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-07 60.8 103 31.1
AUR62028578 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.5e-07 60.8 79 32.9
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 1.5e-07 60.8 140 28.6
BcaC06g35181 Brassica carinata HOM05D000003 ORTHO05D000004 2.0e-07 60.5 70 41.4
CANSAT01G2912 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-07 60.1 110 32.7
Duzib170G1100 Durio zibethinus HOM05D000003 ORTHO05D000167 2.6e-07 60.1 94 37.2
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-07 59.7 192 21.9
AUR62019281 Chenopodium quinoa HOM05D008685 ORTHO05D000022 3.4e-07 59.7 68 41.2
AUR62026187 Chenopodium quinoa HOM05D008685 ORTHO05D000022 3.4e-07 59.7 80 36.2
RcHm_v2.0_Chr4g0418351 Rosa chinensis HOM05D011676 ORTHO05D019153 3.4e-07 59.7 89 33.7
AUR62033651 Chenopodium quinoa HOM05D008685 ORTHO05D000022 4.5e-07 59.3 79 34.2
AUR62038314 Chenopodium quinoa HOM05D008685 ORTHO05D000022 4.5e-07 59.3 80 33.8
FvH4_5g04240 Fragaria vesca HOM05D000003 ORTHO05D000004 4.5e-07 59.3 150 30.0
CANSAT21G1904 Cannabis sativa HOM05D000003 ORTHO05D000004 5.9e-07 58.9 110 32.7
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 5.9e-07 58.9 89 38.2
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 5.9e-07 58.9 89 38.2
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 5.9e-07 58.9 89 38.2
Thecc.04G000200 Theobroma cacao HOM05D000155 ORTHO05D000022 5.9e-07 58.9 102 31.4
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 5.9e-07 58.9 89 31.5
AUR62034846 Chenopodium quinoa HOM05D008685 ORTHO05D000022 7.7e-07 58.5 54 44.4
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 1.0e-06 58.2 70 40.0
BolC3t18275H Brassica oleracea HOM05D000003 ORTHO05D001498 1.0e-06 58.2 70 40.0
BolC7t42403H Brassica oleracea HOM05D000003 ORTHO05D001498 1.0e-06 58.2 70 40.0
CANSAT54G1512 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 58.2 139 30.2
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 58.2 94 33.0
SHI15776 Sapria himalayana HOM05D004990 ORTHO05D000022 1.0e-06 58.2 106 29.2
Thecc.06G025800 Theobroma cacao HOM05D000003 ORTHO05D000022 1.0e-06 58.2 82 35.4
AUR62032019 Chenopodium quinoa HOM05D019958 ORTHO05D000022 1.3e-06 57.8 62 37.1
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 1.3e-06 57.8 75 37.3
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 1.3e-06 57.8 104 31.7
LjContig00408g0013319 Lotus japonicus HOM05D000003 ORTHO05D000004 1.3e-06 57.8 98 30.6
SHI19656 Sapria himalayana HOM05D004990 ORTHO05D000022 1.3e-06 57.8 80 36.2
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 57.4 80 38.8
BcaC05g25416 Brassica carinata HOM05D000003 ORTHO05D000004 1.7e-06 57.4 70 40.0
CANSAT54G0363 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-06 57.4 106 28.3
AUR62034246 Chenopodium quinoa HOM05D019958 ORTHO05D000022 1.7e-06 57.4 80 33.8
COL.COLO4_07368 Corchorus olitorius HOM05D000003 ORTHO05D000022 1.7e-06 57.4 109 29.4
Hma1.2p1_0028F.1_g017510 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.2e-06 57.0 80 37.5
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 2.2e-06 57.0 106 30.2
SHI19424 Sapria himalayana HOM05D004990 ORTHO05D000022 2.2e-06 57.0 96 29.2
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-06 56.6 113 32.7
CANSAT21G0492 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-06 56.6 94 26.6
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-06 56.6 94 31.9
AUR62039453 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.9e-06 56.6 111 26.1
SHI17669 Sapria himalayana HOM05D004990 ORTHO05D000022 2.9e-06 56.6 76 35.5
Sed0007758 Sechium edule HOM05D000003 ORTHO05D000004 2.9e-06 56.6 92 34.8
TWI23G1168 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.9e-06 56.6 95 32.6
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.9e-06 56.6 79 36.7
EL10Ac8g18564 Beta vulgaris HOM05D034106 ORTHO05D030997 3.8e-06 56.2 63 41.3
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-06 56.2 86 34.9
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 3.8e-06 56.2 85 37.6
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.8e-06 56.2 96 31.2
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-06 55.8 79 39.2
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 5.0e-06 55.8 78 35.9
COL.COLO4_27635 Corchorus olitorius HOM05D000003 ORTHO05D000022 5.0e-06 55.8 99 37.4
FvH4_3g23492 Fragaria vesca HOM05D000279 ORTHO05D000498 5.0e-06 55.8 99 34.3
SHI30999 Sapria himalayana HOM05D000024 ORTHO05D000007 5.0e-06 55.8 84 33.3
SHI34270 Sapria himalayana HOM05D004990 ORTHO05D000022 5.0e-06 55.8 96 34.4
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 6.5e-06 55.5 102 31.4
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 6.5e-06 55.5 112 26.8
RcHm_v2.0_Chr5g0041361 Rosa chinensis HOM05D000279 ORTHO05D000022 6.5e-06 55.5 101 34.7
SHI33964 Sapria himalayana HOM05D002114 ORTHO05D002155 6.5e-06 55.5 87 29.9
SHI41116 Sapria himalayana HOM05D000024 ORTHO05D000007 6.5e-06 55.5 87 33.3
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 8.5e-06 55.1 70 37.1
BcaC09g48852 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-06 55.1 70 38.6
FvH4_2g12003 Fragaria vesca HOM05D000003 ORTHO05D000004 8.5e-06 55.1 113 31.9
PSO339G5198 Papaver somniferum HOM05D000155 ORTHO05D000022 8.5e-06 55.1 77 36.4
Prupe.4G223300 Prunus persica HOM05D000279 ORTHO05D000022 8.5e-06 55.1 79 38.0
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 8.5e-06 55.1 82 36.6
Sabra17G0024800 Salix brachista HOM05D000003 ORTHO05D000022 8.5e-06 55.1 112 31.2


User provided reference genes

Program Settings