Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01380 Beta vulgaris HOM05D005729 ORTHO05D007026 8.7e-34 146.4 72 100.0
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 4.2e-28 127.5 65 95.4
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 6.2e-24 113.6 66 87.9
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 1.0e-21 106.3 65 78.5
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 4.2e-20 100.9 67 77.6
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 2.1e-19 98.6 69 75.4
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 1.5e-17 92.4 65 67.7
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 9.0e-15 83.2 65 66.2
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.6e-14 81.6 66 65.2
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 3.4e-14 81.3 65 63.1
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 4.5e-14 80.9 66 63.6
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 4.5e-14 80.9 66 65.2
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 5.9e-14 80.5 66 65.2
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 1.3e-13 79.3 68 60.3
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 1.3e-13 79.3 69 59.4
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 2.2e-13 78.6 72 62.5
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 2.9e-13 78.2 66 54.5
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 3.8e-13 77.8 68 58.8
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 5.0e-13 77.4 66 63.6
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 5.0e-13 77.4 66 62.1
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 1.1e-12 76.3 65 60.0
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 1.9e-12 75.5 66 59.1
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 1.9e-12 75.5 67 56.7
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 2.5e-12 75.1 65 61.5
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 2.5e-12 75.1 73 54.8
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 2.5e-12 75.1 65 56.9
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 3.2e-12 74.7 65 60.0
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 3.2e-12 74.7 65 60.0
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 3.2e-12 74.7 65 60.0
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 4.2e-12 74.3 65 60.0
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 5.5e-12 73.9 66 63.6
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 7.2e-12 73.6 65 58.5
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 7.2e-12 73.6 65 58.5
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 7.2e-12 73.6 65 58.5
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 7.2e-12 73.6 66 60.6
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 7.2e-12 73.6 68 55.9
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 9.4e-12 73.2 71 54.9
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 9.4e-12 73.2 66 59.1
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 9.4e-12 73.2 67 58.2
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 1.2e-11 72.8 65 58.5
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 1.6e-11 72.4 74 59.5
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 1.6e-11 72.4 67 58.2
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 1.6e-11 72.4 68 55.9
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.6e-11 72.4 68 58.8
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.6e-11 72.4 65 63.1
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 2.1e-11 72.0 67 58.2
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 2.1e-11 72.0 66 59.1
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 2.7e-11 71.6 67 59.7
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 3.6e-11 71.2 66 59.1
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 3.6e-11 71.2 79 50.6
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 6.1e-11 70.5 65 56.9
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 6.1e-11 70.5 65 56.9
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 6.1e-11 70.5 65 61.5
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 7.9e-11 70.1 73 53.4
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 7.9e-11 70.1 67 53.7
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 7.9e-11 70.1 65 58.5
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 7.9e-11 70.1 65 61.5
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 1.0e-10 69.7 65 63.1
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 1.4e-10 69.3 67 58.2
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 1.4e-10 69.3 69 56.5
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 1.4e-10 69.3 65 60.0
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 1.8e-10 68.9 67 59.7
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 1.8e-10 68.9 69 59.4
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 1.8e-10 68.9 66 53.0
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 2.3e-10 68.6 66 56.1
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 2.3e-10 68.6 70 58.6
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 2.3e-10 68.6 69 55.1
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 2.3e-10 68.6 71 53.5
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 3.0e-10 68.2 66 57.6
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 3.0e-10 68.2 66 57.6
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 3.0e-10 68.2 67 52.2
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 3.0e-10 68.2 66 59.1
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 3.9e-10 67.8 67 56.7
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 5.1e-10 67.4 68 57.4
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 6.7e-10 67.0 67 62.7
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 6.7e-10 67.0 67 56.7
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 6.7e-10 67.0 70 57.1
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 8.8e-10 66.6 66 56.1
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 8.8e-10 66.6 72 51.4
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 1.1e-09 66.2 68 54.4
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.1e-09 66.2 67 49.3
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.5e-09 65.9 82 46.3
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 1.5e-09 65.9 69 56.5
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 1.5e-09 65.9 65 55.4
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 1.5e-09 65.9 65 55.4
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 1.5e-09 65.9 69 53.6
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 1.5e-09 65.9 69 55.1
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.5e-09 65.9 67 49.3
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 2.5e-09 65.1 68 52.9
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 2.5e-09 65.1 66 51.5
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 3.3e-09 64.7 66 54.5
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 3.3e-09 64.7 66 53.0
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 5.7e-09 63.9 69 55.1
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 7.4e-09 63.5 75 50.7
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 7.4e-09 63.5 66 57.6
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 7.4e-09 63.5 65 53.8
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 1.7e-08 62.4 68 55.9
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 2.8e-08 61.6 70 55.7
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 1.1e-07 59.7 71 52.1
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.8e-07 58.9 67 49.3
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 2.4e-07 58.5 67 47.8
Atru.chr6.2684 Acer truncatum HOM05D005729 ORTHO05D007026 3.1e-07 58.2 65 56.9
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 4.1e-07 57.8 68 50.0
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 5.3e-07 57.4 65 53.8
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 5.3e-07 57.4 66 54.5
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 1.2e-06 56.2 62 56.5
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 2.6e-06 55.1 76 48.7
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 3.4e-06 54.7 81 43.2
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 4.5e-06 54.3 68 45.6
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 4.5e-06 54.3 65 46.2
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 5.9e-06 53.9 65 52.3


User provided reference genes

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