Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.5e-115 419.5 208 100.0
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.6e-94 349.0 210 84.8
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 5.3e-92 341.3 210 82.4
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 1.7e-85 319.7 211 76.3
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 1.3e-74 283.5 211 69.2
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 5.0e-74 281.6 212 68.9
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 4.2e-73 278.5 205 68.3
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 4.2e-73 278.5 204 69.1
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 5.5e-73 278.1 210 70.5
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 7.2e-73 277.7 207 69.1
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 9.4e-73 277.3 207 68.6
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 6.1e-72 274.6 206 67.5
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 8.0e-72 274.2 217 67.3
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 8.0e-72 274.2 210 68.6
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 3.0e-71 272.3 210 65.7
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 5.2e-71 271.6 212 67.5
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 6.8e-71 271.2 201 67.2
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 8.8e-71 270.8 201 66.7
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.0e-70 269.6 201 67.2
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 2.0e-70 269.6 201 67.2
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 2.0e-70 269.6 203 70.0
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 4.4e-70 268.5 210 65.2
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 5.7e-70 268.1 209 65.1
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 1.7e-69 266.5 209 67.5
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 1.7e-69 266.5 206 67.5
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 2.2e-69 266.2 212 66.5
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 3.7e-69 265.4 204 67.2
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 3.7e-69 265.4 206 69.4
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 6.3e-69 264.6 205 67.3
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 6.3e-69 264.6 207 65.2
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 1.1e-68 263.8 205 66.8
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 1.1e-68 263.8 217 64.5
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.8e-68 263.1 210 64.3
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 2.4e-68 262.7 188 71.3
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 2.4e-68 262.7 213 66.2
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 3.1e-68 262.3 206 66.5
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 4.1e-68 261.9 203 67.0
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 4.1e-68 261.9 211 65.4
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 4.1e-68 261.9 202 68.8
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 5.4e-68 261.5 205 66.3
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 7.0e-68 261.2 215 63.7
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 9.1e-68 260.8 215 66.5
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 1.2e-67 260.4 209 65.1
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.6e-67 260.0 203 68.0
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 2.0e-67 259.6 210 65.7
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 2.0e-67 259.6 207 67.1
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 3.5e-67 258.8 205 66.3
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 4.5e-67 258.5 209 66.0
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 5.9e-67 258.1 206 65.5
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 1.3e-66 256.9 202 66.8
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 1.7e-66 256.5 212 66.5
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.7e-66 256.5 205 65.4
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 2.9e-66 255.8 202 65.3
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 2.9e-66 255.8 213 62.0
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 8.6e-66 254.2 205 67.3
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 3.3e-65 252.3 209 62.7
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 4.2e-65 251.9 213 63.8
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 7.2e-65 251.1 211 59.2
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 7.2e-65 251.1 211 59.2
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.2e-64 250.4 219 61.2
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 2.1e-64 249.6 209 62.7
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.8e-64 249.2 191 64.9
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 2.8e-64 249.2 209 62.7
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 3.6e-64 248.8 209 62.7
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 3.6e-64 248.8 209 61.2
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 6.1e-64 248.1 198 64.6
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 6.1e-64 248.1 198 64.6
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 8.0e-64 247.7 209 62.2
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 8.0e-64 247.7 202 63.9
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.4e-63 246.9 210 63.8
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 1.4e-63 246.9 209 62.2
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 1.8e-63 246.5 209 62.2
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 2.3e-63 246.1 208 61.5
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 3.0e-63 245.7 205 63.9
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 4.0e-63 245.4 203 63.1
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 6.8e-63 244.6 201 64.7
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 1.5e-62 243.4 206 60.2
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 5.7e-62 241.5 174 66.7
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 7.5e-62 241.1 197 62.4
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 4.9e-61 238.4 204 63.2
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 4.9e-61 238.4 210 61.9
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.9e-61 238.4 177 68.4
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 6.3e-61 238.0 166 70.5
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.1e-60 235.7 137 80.3
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 5.4e-60 235.0 148 73.6
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 2.3e-58 229.6 137 81.0
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 2.3e-58 229.6 175 65.1
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 3.8e-58 228.8 177 66.7
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 6.6e-58 228.0 205 61.5
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.1e-57 227.3 169 66.9
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 1.9e-57 226.5 182 61.5
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 1.2e-56 223.8 128 80.5
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.2e-56 223.8 218 56.9
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 4.4e-54 215.3 173 65.9
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.8e-54 214.9 205 58.0
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 7.5e-54 214.5 140 71.4
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 3.5e-51 205.7 156 66.0
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 9.8e-46 187.6 144 63.9
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 7.0e-44 181.4 119 72.3
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 2.5e-41 172.9 137 59.1
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 2.1e-40 169.9 146 59.6
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 5.2e-39 165.2 149 57.0
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 6.8e-39 164.9 143 57.3
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 1.2e-38 164.1 112 67.9
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 9.2e-36 154.5 86 80.2
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 4.7e-32 142.1 170 51.2
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.2e-30 137.5 130 53.8
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 7.1e-28 128.3 206 42.2
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 2.1e-24 116.7 72 75.0
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 2.8e-24 116.3 140 49.3
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 2.9e-13 79.7 137 39.4


User provided reference genes

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