Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-79 297.7 142 100.0
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 4.6e-79 297.7 142 100.0
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-78 295.4 140 100.0
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-78 295.4 140 100.0
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-78 295.4 140 100.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-70 269.6 140 93.6
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 5.7e-61 237.7 139 79.1
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 9.7e-53 210.3 139 71.9
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.3e-52 207.6 138 71.0
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.4e-51 205.7 133 73.7
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.8e-46 187.2 138 65.9
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.6e-45 185.7 139 62.6
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 7.4e-45 184.1 139 59.7
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 1.8e-43 179.5 150 67.3
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.9e-41 172.2 136 57.4
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.9e-41 172.2 136 57.4
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-40 170.2 134 57.5
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-40 169.1 134 57.5
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.5e-40 169.1 136 56.6
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-40 168.7 136 55.9
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-39 166.0 136 52.9
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.1e-39 164.5 134 57.5
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 7.9e-39 164.1 136 52.9
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.4e-38 163.3 134 56.7
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-37 160.2 137 52.6
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.7e-36 156.4 134 53.0
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 7.0e-35 151.0 136 50.7
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 7.0e-35 151.0 138 49.3
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 7.0e-35 151.0 139 50.4
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 7.0e-35 151.0 139 50.4
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.2e-34 150.2 139 50.4
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-34 149.4 139 51.8
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-34 149.4 139 51.8
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 2.0e-34 149.4 139 51.8
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.5e-34 148.3 133 50.4
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.5e-34 148.3 133 50.4
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.5e-34 148.3 133 50.4
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 5.9e-34 147.9 136 52.2
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 7.7e-34 147.5 133 49.6
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 1.0e-33 147.1 139 51.1
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.8e-33 145.2 133 49.6
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 5.0e-33 144.8 136 50.7
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 5.0e-33 144.8 136 50.7
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 6.5e-33 144.4 132 53.8
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 1.9e-32 142.9 140 50.0
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.9e-32 142.9 141 48.9
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.9e-32 142.9 141 48.9
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.9e-32 142.9 139 49.6
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.5e-32 142.5 132 49.2
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 5.5e-32 141.4 143 50.3
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 5.5e-32 141.4 139 50.4
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 9.4e-32 140.6 139 46.8
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-31 140.2 134 49.3
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 4.7e-31 138.3 126 54.8
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 8.0e-31 137.5 139 46.8
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-30 136.7 126 53.2
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.0e-30 135.2 134 48.5
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-30 134.4 134 48.5
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.7e-30 134.4 134 48.5
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 6.7e-30 134.4 133 49.6
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.0e-29 132.9 143 45.5
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 2.6e-29 132.5 134 47.8
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.3e-29 132.1 134 47.0
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-28 130.2 134 47.0
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-28 129.8 140 48.6
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-28 129.8 139 47.5
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.7e-28 129.8 142 47.9
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 2.8e-28 129.0 134 46.3
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-28 128.6 141 46.8
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.8e-28 128.3 134 45.5
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.3e-28 127.9 134 45.5
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 3.1e-27 125.6 136 49.3
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.1e-27 125.6 134 45.5
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.3e-27 124.8 135 46.7
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 6.5e-25 117.9 134 46.3
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-24 116.7 136 45.6
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-24 116.3 133 43.6
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.2e-24 115.5 145 43.4
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-24 115.2 117 47.0
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 7.2e-24 114.4 134 47.0
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.1e-23 111.3 117 46.2
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.3e-22 109.4 133 45.1
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 3.0e-22 109.0 136 44.9
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 3.0e-22 109.0 134 42.5
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 4.0e-22 108.6 157 39.5
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.6e-21 105.9 81 55.6
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-21 105.5 136 41.2
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-19 100.1 171 36.3
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-19 100.1 171 36.3
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-19 100.1 136 41.9
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-19 99.8 170 35.9
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-19 99.4 134 41.0
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-19 99.0 138 41.3
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 5.4e-19 98.2 125 43.2
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.7e-18 95.9 135 40.7
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.5e-18 95.5 138 40.6
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-18 95.5 137 42.3
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 7.7e-18 94.4 133 39.1
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 7.7e-18 94.4 140 38.6
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-17 93.6 133 39.1
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 5.0e-17 91.7 137 38.0
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-16 90.5 137 40.9
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 5.5e-16 88.2 135 37.8
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 4.7e-15 85.1 81 51.9
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.0e-14 84.0 151 33.8
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-14 83.6 139 36.0
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-14 83.2 138 38.4
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 2.3e-14 82.8 88 42.0
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 5.2e-14 81.6 140 36.4
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 6.8e-14 81.3 95 43.2
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 7.5e-13 77.8 138 34.8
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 9.8e-13 77.4 140 35.7
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-12 77.0 102 43.1
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-12 76.6 124 39.5
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.8e-12 75.9 127 37.0
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.7e-12 75.5 135 37.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.8e-11 73.2 108 39.8
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.4e-11 71.6 110 40.0
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 9.2e-11 70.9 94 43.6
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.5e-10 68.6 118 35.6
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 1.0e-09 67.4 76 51.3
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-09 67.0 85 37.6
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 5.0e-09 65.1 74 45.9
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 1.6e-07 60.1 80 40.0
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 5.2e-06 55.1 91 39.6
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 6.8e-06 54.7 89 38.2


User provided reference genes

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