Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-135 485.7 235 100.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.9e-107 391.7 238 82.8
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 5.3e-96 354.8 242 76.9
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 5.3e-96 354.8 242 76.9
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 5.3e-96 354.8 242 76.9
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-71 273.1 241 59.3
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 5.3e-64 248.4 241 55.2
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.6e-63 246.1 234 55.6
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.1e-60 236.5 247 52.6
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.2e-55 220.7 243 50.6
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.7e-49 200.3 239 44.8
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-48 196.8 244 45.1
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-48 196.8 244 45.1
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-47 193.4 244 44.3
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.7e-44 183.0 234 44.4
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.7e-44 182.2 237 42.2
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.1e-44 181.8 234 44.4
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.3e-43 179.9 240 40.8
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.3e-43 179.9 234 44.4
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.0e-43 179.1 240 43.3
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-42 176.8 150 67.3
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-42 176.8 150 67.3
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.0e-42 176.8 236 41.1
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.7e-42 175.3 238 40.3
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 9.7e-42 174.5 241 42.3
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.7e-42 174.5 215 42.8
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 9.7e-42 174.5 237 43.5
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 6.3e-41 171.8 237 42.6
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.1e-40 171.0 241 42.3
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.4e-40 170.6 240 39.6
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.4e-40 169.9 237 42.2
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 2.4e-40 169.9 234 41.5
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 5.3e-40 168.7 241 40.2
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.0e-40 168.3 141 56.0
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-39 167.2 239 38.9
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-39 167.2 239 38.9
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-39 166.8 239 39.3
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 2.7e-39 166.4 241 39.8
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.5e-39 166.0 240 41.7
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 3.5e-39 166.0 240 41.7
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-38 163.7 244 39.3
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.7e-38 163.7 240 39.2
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-38 163.3 239 38.9
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-37 159.5 236 39.0
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-37 159.5 236 39.0
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 5.5e-37 158.7 241 40.2
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 5.5e-37 158.7 239 38.5
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-36 157.5 242 41.7
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.6e-36 157.1 239 37.2
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.0e-35 152.5 237 39.2
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 6.8e-35 151.8 228 40.8
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-34 150.2 230 38.7
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 4.4e-34 149.1 142 50.7
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.4e-34 149.1 230 37.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 4.4e-34 149.1 142 52.1
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.8e-34 147.9 236 38.6
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-33 147.5 237 38.0
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-33 147.5 234 36.3
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-33 147.5 233 38.6
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 3.7e-33 146.0 237 38.4
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.8e-33 145.6 234 37.2
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 8.3e-33 144.8 140 51.4
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.1e-32 144.4 232 37.9
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-32 143.7 230 37.4
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-32 142.9 242 36.0
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 3.1e-32 142.9 240 36.2
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.1e-32 142.5 230 37.4
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-31 140.6 230 36.5
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-31 140.6 237 37.6
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 2.7e-31 139.8 250 37.6
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.5e-31 139.4 233 37.3
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 1.0e-30 137.9 126 57.1
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.3e-30 137.5 240 37.1
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-29 132.5 136 49.3
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-28 130.6 138 47.1
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-28 130.6 213 37.6
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.1e-28 128.6 236 33.9
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.0e-27 127.9 237 37.1
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-26 124.0 140 45.0
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 9.8e-26 121.3 241 36.1
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.8e-26 121.3 242 36.8
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 8.3e-25 118.2 127 49.6
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-24 117.1 233 35.2
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 4.1e-24 115.9 238 31.5
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 2.9e-22 109.8 240 32.5
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 2.5e-21 106.7 211 36.5
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 4.3e-21 105.9 240 31.7
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.3e-21 105.9 172 36.6
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 5.6e-21 105.5 171 38.0
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.6e-21 105.5 205 33.2
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.3e-21 105.1 131 42.0
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 6.1e-20 102.1 240 30.0
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.4e-19 100.9 224 31.7
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.8e-19 100.5 240 31.2
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-19 100.1 230 30.4
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 4.0e-19 99.4 243 31.3
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.2e-19 99.0 239 32.6
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-18 97.1 243 30.5
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-18 96.3 238 28.6
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-17 93.6 197 31.5
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 2.2e-17 93.6 165 34.5
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 2.9e-17 93.2 147 35.4
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-17 92.8 200 28.5
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-17 92.8 212 29.7
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-16 91.3 124 47.6
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.4e-16 90.9 237 30.4
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-16 90.5 197 29.9
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 2.4e-16 90.1 231 28.1
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 4.1e-16 89.4 238 28.2
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 7.0e-16 88.6 132 36.4
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-15 87.8 220 30.5
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 2.7e-15 86.7 230 27.0
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.5e-15 86.3 217 29.5
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.9e-14 82.8 128 42.2
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-13 81.3 141 35.5
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 1.5e-13 80.9 208 31.2
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 3.3e-13 79.7 101 38.6
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.8e-12 76.6 238 29.0
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-11 73.9 111 36.0
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 5.2e-11 72.4 93 41.9
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 6.8e-11 72.0 103 35.9
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 3.4e-10 69.7 146 34.9
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 7.5e-10 68.6 140 35.0
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.1e-08 62.8 137 32.8
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 7.8e-07 58.5 110 37.3
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 1.0e-06 58.2 58 44.8


User provided reference genes

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