Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-135 485.0 228 100.0
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 9.9e-124 446.8 232 93.1
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 9.9e-124 446.8 232 93.1
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 9.9e-124 446.8 232 93.1
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 7.6e-108 394.0 238 82.8
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-97 360.1 231 73.6
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.3e-87 325.1 227 69.2
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.7e-86 322.0 231 67.1
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.7e-80 300.8 230 63.9
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.8e-75 285.4 226 61.9
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 3.7e-70 268.9 140 93.6
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 3.7e-70 268.9 140 93.6
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.9e-66 256.5 229 53.7
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.9e-66 256.5 229 53.7
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.2e-66 255.4 229 52.4
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 9.4e-66 254.2 233 52.8
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.6e-65 253.4 233 55.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.1e-65 253.1 229 52.8
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-62 243.4 227 53.3
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.4e-61 239.6 227 52.9
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.1e-61 237.7 227 52.9
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-59 234.2 229 49.3
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.3e-59 233.8 227 50.2
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.5e-59 231.1 208 52.9
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 4.2e-58 228.8 226 50.0
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 7.2e-58 228.0 226 50.0
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.4e-58 227.6 228 48.2
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.8e-56 223.4 227 49.3
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.0e-56 222.6 229 47.2
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 6.7e-56 221.5 232 46.6
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-55 220.3 230 50.0
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 9.7e-55 217.6 230 49.1
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-54 215.7 230 48.7
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 6.3e-54 214.9 233 46.8
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 8.2e-54 214.5 232 46.1
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.1e-53 212.6 233 48.5
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 3.1e-53 212.6 233 48.5
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 3.1e-53 212.6 232 46.6
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 4.1e-53 212.2 233 45.9
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 5.3e-53 211.8 232 46.1
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 7.0e-53 211.5 232 46.1
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 2.6e-52 209.5 232 45.7
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 2.6e-52 209.5 232 45.7
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 3.5e-52 209.1 235 48.1
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 5.9e-52 208.4 218 49.1
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.2e-51 206.5 174 55.2
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 3.8e-51 205.7 232 44.8
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-49 200.3 234 46.2
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.2e-48 195.3 226 44.7
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.8e-48 194.5 195 48.7
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.8e-48 194.5 223 44.8
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.5e-47 193.7 233 45.9
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-47 193.7 223 44.4
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 4.4e-47 192.2 218 44.5
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-47 191.8 226 44.2
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-47 191.8 223 44.4
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 7.5e-47 191.4 223 44.8
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.8e-47 191.0 223 44.8
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 9.8e-47 191.0 226 44.7
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 4.8e-46 188.7 235 42.1
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 6.3e-46 188.3 236 44.1
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-45 187.6 227 44.9
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-45 186.4 223 43.9
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.4e-45 185.3 223 43.5
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.9e-44 181.8 223 43.0
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 1.3e-43 180.6 237 41.8
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.5e-43 178.3 223 42.6
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.5e-43 177.9 223 42.6
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.2e-42 175.6 206 45.1
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.1e-41 171.8 206 44.7
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-39 166.8 229 40.6
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-39 166.8 229 40.6
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.6e-39 166.4 156 48.7
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.7e-38 163.7 166 49.4
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.4e-37 159.8 223 39.5
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.1e-37 157.9 162 47.5
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 3.5e-36 156.0 233 40.3
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 4.5e-36 155.6 225 37.8
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-35 153.3 234 40.6
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.6e-35 151.8 223 37.7
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.6e-35 151.4 232 41.4
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.5e-34 150.6 143 51.7
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 5.5e-34 148.7 204 44.6
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 5.5e-34 148.7 226 39.8
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.8e-33 146.4 228 37.7
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 1.4e-32 144.1 230 37.4
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.2e-31 141.0 215 36.7
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-31 140.6 230 36.5
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-31 139.8 230 35.2
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-31 139.8 230 35.7
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 3.4e-31 139.4 223 36.8
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 9.8e-31 137.9 210 38.1
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 9.8e-31 137.9 126 57.1
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-30 136.3 228 36.4
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-29 134.0 198 38.4
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-29 132.9 136 49.3
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 3.2e-29 132.9 222 35.1
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.0e-28 130.2 231 36.4
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 7.8e-28 128.3 226 34.5
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-27 127.5 210 36.2
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-27 126.3 226 35.4
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 8.6e-27 124.8 209 35.9
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-26 124.4 140 45.0
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 2.5e-26 123.2 126 50.8
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 9.5e-26 121.3 191 34.0
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 2.8e-25 119.8 188 36.2
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 4.7e-25 119.0 223 31.8
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 8.0e-25 118.2 303 27.7
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 8.0e-25 118.2 127 49.6
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-24 116.3 188 35.6
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 9.8e-23 111.3 138 42.8
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.7e-22 110.5 231 33.8
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 3.7e-22 109.4 235 33.2
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 4.9e-22 109.0 185 34.6
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.4e-21 105.5 131 42.0
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 4.6e-20 102.4 127 38.6
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 1.3e-19 100.9 207 34.8
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 9.5e-18 94.7 164 36.0
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 2.1e-17 93.6 113 38.1
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 4.7e-17 92.4 137 40.9
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.8e-16 90.5 167 35.9
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 3.7e-14 82.8 123 40.7
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.7e-14 82.8 128 42.2
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.2e-13 78.2 159 32.7
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.6e-12 77.4 81 49.4
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 1.0e-11 74.7 146 33.6
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-11 73.9 111 36.0
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 8.1e-09 65.1 74 50.0
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.1e-08 63.2 124 34.7
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 8.9e-08 61.6 85 34.1
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 9.9e-07 58.2 81 38.3


User provided reference genes

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