Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 8.0e-61 237.3 153 100.0
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 9.2e-33 144.1 141 68.8
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 3.5e-32 142.1 137 68.6
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.7e-31 139.8 136 69.1
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 6.6e-31 137.9 139 67.6
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 5.6e-30 134.8 136 66.9
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 7.3e-30 134.4 138 69.6
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 2.1e-29 132.9 138 73.2
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 1.8e-28 129.8 137 72.3
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 2.3e-28 129.4 138 65.9
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 6.8e-28 127.9 134 67.2
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 8.9e-28 127.5 129 72.9
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 1.2e-27 127.1 137 67.9
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 3.4e-27 125.6 138 61.6
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 5.8e-27 124.8 130 65.4
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 9.8e-27 124.0 138 66.7
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 1.7e-26 123.2 134 70.9
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 2.2e-26 122.9 137 67.9
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.7e-26 122.1 185 56.2
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 4.9e-26 121.7 129 71.3
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 4.9e-26 121.7 137 65.0
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 1.1e-25 120.6 138 65.9
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 1.4e-25 120.2 154 59.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 3.2e-25 119.0 137 64.2
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 3.2e-25 119.0 129 68.2
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 3.2e-25 119.0 136 65.4
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 4.1e-25 118.6 129 70.5
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 7.0e-25 117.9 145 62.1
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 7.0e-25 117.9 142 60.6
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 9.2e-25 117.5 135 67.4
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 9.2e-25 117.5 135 67.4
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 9.2e-25 117.5 130 68.5
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 1.2e-24 117.1 149 65.1
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 1.6e-24 116.7 135 68.9
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 2.0e-24 116.3 138 61.6
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 2.7e-24 115.9 140 63.6
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 3.5e-24 115.5 130 66.9
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 4.6e-24 115.2 138 63.8
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 4.6e-24 115.2 138 63.8
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 6.0e-24 114.8 138 60.1
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 1.0e-23 114.0 138 68.1
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 2.3e-23 112.8 138 61.6
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 2.3e-23 112.8 128 71.1
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 2.3e-23 112.8 130 66.2
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 5.0e-23 111.7 147 62.6
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 8.6e-23 110.9 140 62.9
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 1.1e-22 110.5 137 66.4
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 1.1e-22 110.5 142 64.8
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 1.5e-22 110.2 131 64.9
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 1.5e-22 110.2 137 63.5
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 1.9e-22 109.8 141 64.5
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 1.9e-22 109.8 138 63.8
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 1.9e-22 109.8 138 63.8
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 7.3e-22 107.8 130 64.6
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 7.3e-22 107.8 138 65.9
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 1.6e-21 106.7 141 61.7
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 3.6e-21 105.5 162 52.5
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 4.7e-21 105.1 138 65.9
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 4.7e-21 105.1 126 66.7
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 4.7e-21 105.1 141 59.6
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 6.2e-21 104.8 141 59.6
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.1e-20 104.0 137 65.0
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 1.1e-20 104.0 129 68.2
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 1.4e-20 103.6 136 65.4
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 1.8e-20 103.2 129 67.4
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 1.5e-19 100.1 135 63.0
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 3.4e-19 99.0 141 61.0
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 3.4e-19 99.0 129 62.8
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 3.4e-19 99.0 141 61.0
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 3.4e-19 99.0 129 62.8
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 1.7e-18 96.7 127 58.3
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 1.7e-18 96.7 134 63.4
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 2.2e-18 96.3 138 56.5
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.9e-17 93.2 123 56.1
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 5.4e-17 91.7 135 58.5
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 1.6e-16 90.1 129 60.5
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 6.0e-16 88.2 153 43.8
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 1.0e-15 87.4 128 64.1
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 2.3e-15 86.3 138 59.4
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 3.0e-15 85.9 137 59.1
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 1.5e-14 83.6 118 59.3
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 3.3e-14 82.4 99 63.6
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 2.1e-13 79.7 160 50.0
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 2.8e-13 79.3 142 57.0
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 4.7e-13 78.6 111 66.7
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 8.1e-13 77.8 138 57.2
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 1.1e-12 77.4 90 64.4
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 1.4e-12 77.0 148 53.4
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 1.8e-12 76.6 100 67.0
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 4.0e-12 75.5 99 64.6
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 1.2e-11 73.9 119 55.5
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 4.4e-11 72.0 98 71.4
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.3e-10 70.5 92 70.7
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 7.1e-09 64.7 108 47.2
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 1.0e-07 60.8 110 60.9
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 1.7e-07 60.1 134 52.2
AagrBONN_evm.TU.Sc2ySwM_344.1812 Anthoceros agrestis HOM05D020710 ORTHO05D009250 6.6e-07 58.2 132 51.5
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 2.5e-06 56.2 33 78.8
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 2.5e-06 56.2 59 44.1
MD11G1234100 Malus domestica HOM05D007581 ORTHO05D009250 2.5e-06 56.2 76 44.7
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 5.6e-06 55.1 97 66.0


User provided reference genes

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