Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01296 Beta vulgaris HOM05D000611 ORTHO05D004334 0.0e+00 1522.3 1013 100.0
EL10Ac2g04473 Beta vulgaris HOM05D000611 ORTHO05D004334 3.0e-79 301.2 663 36.0
AUR62023184 Chenopodium quinoa HOM05D000611 ORTHO05D004334 1.3e-42 179.5 248 47.6
AUR62023231 Chenopodium quinoa HOM05D000611 ORTHO05D004334 2.3e-39 168.7 248 44.8
AUR62012480 Chenopodium quinoa HOM05D000611 ORTHO05D004334 7.7e-35 153.7 229 42.8
CiPaw.15G093300 Carya illinoinensis HOM05D000611 ORTHO05D004334 6.7e-31 140.6 230 41.7
Dinv19017 Davidia involucrata HOM05D000611 ORTHO05D004334 1.5e-30 139.4 342 36.0
Hund16210 Selenicereus undatus HOM05D000611 ORTHO05D004334 1.7e-29 136.0 288 39.2
GSVIVG01030843001 Vitis vinifera HOM05D000611 ORTHO05D004334 3.7e-29 134.8 248 39.9
TAR622G0440 Trochodendron aralioides HOM05D000611 ORTHO05D004334 4.1e-28 131.3 317 35.0
Haze_14232 Corylus avellana HOM05D000611 ORTHO05D004334 2.0e-27 129.0 227 39.2
Ciclev10011836m.g Citrus clementina HOM05D000611 ORTHO05D004334 7.7e-27 127.1 251 38.6
Cfa007833 Carpinus fangiana HOM05D000611 ORTHO05D004334 1.7e-26 125.9 223 38.6
QL11p039394 Quercus lobata HOM05D000611 ORTHO05D004334 1.7e-26 125.9 296 35.5
Rhsim08G0086400 Rhododendron simsii HOM05D000611 ORTHO05D004334 2.9e-26 125.2 265 36.2
Duzib133G1511 Durio zibethinus HOM05D000611 ORTHO05D004334 5.0e-26 124.4 277 36.5
QL11p002176 Quercus lobata HOM05D000611 ORTHO05D004334 5.0e-26 124.4 233 37.8
Thecc.04G119400 Theobroma cacao HOM05D000611 ORTHO05D004334 6.5e-26 124.0 268 36.2
COL.COLO4_15730 Corchorus olitorius HOM05D000611 ORTHO05D004334 1.9e-25 122.5 245 35.9
QL11p003934 Quercus lobata HOM05D000611 ORTHO05D004334 1.9e-25 122.5 277 36.1
Actinidia22792 Actinidia chinensis HOM05D000611 ORTHO05D004334 1.2e-24 119.8 257 35.4
Nn3g20745 Nelumbo nucifera HOM05D000611 ORTHO05D004334 1.6e-24 119.4 297 33.0
Hma1.2p1_0283F.1_g113480 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 2.7e-24 118.6 245 37.1
Sabra15G0047000 Salix brachista HOM05D000949 ORTHO05D004334 2.7e-24 118.6 277 33.9
Atru.chr1.1837 Acer truncatum HOM05D000611 ORTHO05D004334 6.1e-24 117.5 248 34.3
Sc15g0002490 Simmondsia chinensis HOM05D000611 ORTHO05D004334 8.0e-24 117.1 259 35.5
Hma1.2p1_0832F.1_g225560 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 2.3e-23 115.5 253 36.8
MBI10_g08554_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 2.3e-23 115.5 242 35.1
CSS0039210 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 3.9e-23 114.8 234 36.3
Manes.01G116100 Manihot esculenta HOM05D000611 ORTHO05D004334 5.2e-23 114.4 233 36.9
LjContig00141g0016319 Lotus japonicus HOM05D000611 ORTHO05D004334 8.8e-23 113.6 294 33.3
Sabra17G0106600 Salix brachista HOM05D000611 ORTHO05D004334 8.8e-23 113.6 269 33.8
PSO017G0779 Papaver somniferum HOM05D000611 ORTHO05D004334 1.5e-22 112.8 578 25.4
TWI18G1238 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 1.5e-22 112.8 256 36.7
Sed0014398 Sechium edule HOM05D000611 ORTHO05D004334 2.0e-22 112.5 245 33.9
TAR374G0184 Trochodendron aralioides HOM05D000611 ORTHO05D004334 2.0e-22 112.5 207 37.2
MBI16_g23759_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 3.3e-22 111.7 284 33.5
Eucgr.J01547 Eucalyptus grandis HOM05D000611 ORTHO05D004334 4.4e-22 111.3 280 32.5
PSO170G1854 Papaver somniferum HOM05D000611 ORTHO05D004334 7.4e-22 110.5 229 34.5
Duzib211G0073 Durio zibethinus HOM05D000611 ORTHO05D004334 9.7e-22 110.2 270 34.8
Sc10g0000760 Simmondsia chinensis HOM05D000611 ORTHO05D004334 1.3e-21 109.8 208 33.7
Dinv14884 Davidia involucrata HOM05D000611 ORTHO05D004334 2.2e-21 109.0 317 33.4
CSS0050254 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 2.8e-21 108.6 347 29.7
TWI12G1101 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 2.8e-21 108.6 256 34.8
PSO170G2195 Papaver somniferum HOM05D000611 ORTHO05D004334 6.3e-21 107.5 577 25.5
Gorai.008G058500 Gossypium raimondii HOM05D000611 ORTHO05D004334 8.2e-21 107.1 234 35.9
Cc07_g08100 Coffea canephora HOM05D000611 ORTHO05D004334 1.1e-20 106.7 228 35.5
Sopen02g036080 Solanum pennellii HOM05D000611 ORTHO05D004334 1.4e-20 106.3 266 35.3
VMungo0647G1718 Vigna mungo HOM05D000611 ORTHO05D004334 1.4e-20 106.3 245 35.9
Gohir.D12G055600 Gossypium hirsutum HOM05D000611 ORTHO05D004334 2.4e-20 105.5 234 35.5
Peaxi162Scf00003g00219 Petunia axillaris HOM05D000611 ORTHO05D004334 3.1e-20 105.1 233 36.1
Gohir.A12G056200 Gossypium hirsutum HOM05D000611 ORTHO05D004334 1.2e-19 103.2 251 34.7
Gorai.010G046100 Gossypium raimondii HOM05D000611 ORTHO05D004334 2.0e-19 102.4 234 34.6
Phvul.008G234500 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 2.0e-19 102.4 365 28.8
CAN.G1061.46 Capsicum annuum HOM05D000611 ORTHO05D004334 2.6e-19 102.1 302 32.8
Eucgr.J01631 Eucalyptus grandis HOM05D000611 ORTHO05D004334 2.6e-19 102.1 270 32.6
Lalb_Chr20g0116941 Lupinus albus HOM05D000611 ORTHO05D004334 2.6e-19 102.1 224 33.5
Nitab4.5_0003360g0040 Nicotiana tabacum HOM05D000611 ORTHO05D004334 2.6e-19 102.1 221 37.6
arahy.Tifrunner.gnm1.ann1.J7PSRM Arachis hypogaea HOM05D000611 ORTHO05D004334 3.5e-19 101.7 270 33.3
QL09p038966 Quercus lobata HOM05D000611 ORTHO05D004334 4.5e-19 101.3 126 49.2
CANSAT78G1071 Cannabis sativa HOM05D000611 ORTHO05D004334 7.7e-19 100.5 209 37.8
CDE06G1088 Ceratophyllum demersum HOM05D000611 ORTHO05D004334 1.0e-18 100.1 224 36.2
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.0e-18 100.1 204 36.8
Actinidia17227 Actinidia chinensis HOM05D000611 ORTHO05D004334 1.7e-18 99.4 204 38.7
vmacro22550 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.7e-18 99.4 241 32.4
Haze_12064 Corylus avellana HOM05D000611 ORTHO05D004334 2.2e-18 99.0 225 32.9
Nitab4.5_0002664g0080 Nicotiana tabacum HOM05D000611 ORTHO05D004334 2.9e-18 98.6 230 36.1
Glyma.14G069800 Glycine max HOM05D000611 ORTHO05D004334 6.5e-18 97.4 319 29.5
Phvul.008G234400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 6.5e-18 97.4 224 34.8
Potri.017G126700 Populus trichocarpa HOM05D000611 ORTHO05D004334 8.5e-18 97.1 104 51.0
MSTRG.15320 Avicennia marina HOM05D000611 ORTHO05D004334 1.1e-17 96.7 223 34.5
CSS0037318 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 3.2e-17 95.1 206 35.0
CDE04G0197 Ceratophyllum demersum HOM05D000543 ORTHO05D004334 7.2e-17 94.0 224 33.9
Dinv26577 Davidia involucrata HOM05D000611 ORTHO05D004334 7.2e-17 94.0 239 31.8
arahy.Tifrunner.gnm1.ann1.HDGD4N Arachis hypogaea HOM05D000611 ORTHO05D004334 1.2e-16 93.2 546 25.5
Cfa009035 Carpinus fangiana HOM05D000611 ORTHO05D004334 1.2e-16 93.2 206 34.0
Actinidia36368 Actinidia chinensis HOM05D000611 ORTHO05D004334 1.6e-16 92.8 204 35.3
CSS0013647 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 2.1e-16 92.4 223 32.3
DCAR_003177 Daucus carota HOM05D000611 ORTHO05D004334 3.6e-16 91.7 262 31.7
CsaV3_3G021570 Cucumis sativus L. HOM05D000611 ORTHO05D004334 4.7e-16 91.3 221 33.0
Glyma.04G146300 Glycine max HOM05D000611 ORTHO05D004334 1.8e-15 89.4 222 31.1
ClCG05G011010 Citrullus lanatus HOM05D000611 ORTHO05D004334 2.3e-15 89.0 354 27.7
MELO3C020280.2 Cucumis melo HOM05D000611 ORTHO05D004334 2.3e-15 89.0 244 30.3
MD17G1257100 Malus domestica HOM05D000611 ORTHO05D004334 3.0e-15 88.6 254 31.1
arahy.Tifrunner.gnm1.ann1.FBT475 Arachis hypogaea HOM05D000611 ORTHO05D004334 6.7e-15 87.4 261 28.7
arahy.Tifrunner.gnm1.ann1.1QGT1E Arachis hypogaea HOM05D000611 ORTHO05D004334 8.8e-15 87.0 245 30.6
Migut.L00463 Erythranthe guttata HOM05D000611 ORTHO05D004334 8.8e-15 87.0 307 30.9
THA.LOC104826735 Tarenaya hassleriana HOM05D000611 ORTHO05D004334 1.2e-14 86.7 207 32.4
Medtr5g079490 Medicago truncatula HOM05D000611 ORTHO05D004334 3.3e-14 85.1 248 29.4
Ca_13025_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 5.7e-14 84.3 255 29.8
MD09G1262200 Malus domestica HOM05D000611 ORTHO05D004334 5.7e-14 84.3 250 30.8
Nitab4.5_0001986g0090 Nicotiana tabacum HOM05D000611 ORTHO05D004334 5.7e-14 84.3 214 32.7
PGR119G2064 Punica granatum HOM05D000611 ORTHO05D004334 5.7e-14 84.3 260 28.5
Lalb_Chr18g0053361 Lupinus albus HOM05D000611 ORTHO05D004334 7.5e-14 84.0 253 30.4
Lj6g0027718 Lotus japonicus HOM05D000611 ORTHO05D004334 1.3e-13 83.2 259 31.3
Aa31LG5G23450 Aethionema arabicum HOM05D000611 ORTHO05D004334 1.7e-13 82.8 231 29.9
vmacro22900 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 1.7e-13 82.8 91 47.3
ECA238G1988 Erigeron canadensis HOM05D000611 ORTHO05D004334 2.2e-13 82.4 250 30.4
HanXRQChr09g0262221 Helianthus annuus HOM05D000611 ORTHO05D004334 2.2e-13 82.4 205 30.2
SGA_v2.0_scaffold63G21737 Striga asiatica HOM05D000611 ORTHO05D004334 2.2e-13 82.4 201 34.3
Glyma.11G217600 Glycine max HOM05D000611 ORTHO05D004334 2.8e-13 82.0 108 45.4
TPR.G3467 Trifolium pratense HOM05D000611 ORTHO05D004334 2.8e-13 82.0 250 28.4
arahy.Tifrunner.gnm1.ann1.WY3AB3 Arachis hypogaea HOM05D000611 ORTHO05D004334 3.7e-13 81.6 257 29.2
arahy.Tifrunner.gnm1.ann1.E9G7WB Arachis hypogaea HOM05D000611 ORTHO05D004334 8.2e-13 80.5 257 28.8
Nn4g24174 Nelumbo nucifera HOM05D000611 ORTHO05D004334 8.2e-13 80.5 273 28.6
HanXRQChr01g0019711 Helianthus annuus HOM05D000611 ORTHO05D004334 1.1e-12 80.1 244 28.3
Aqoxy3G00114 Aquilegia oxysepala HOM05D000611 ORTHO05D004334 1.4e-12 79.7 130 38.5
Lsat_1_v5_gn_2_79980 Lactuca sativa HOM05D000379 ORTHO05D004334 1.8e-12 79.3 252 29.0
Sopen03g037880 Solanum pennellii HOM05D000611 ORTHO05D004334 3.1e-12 78.6 221 29.9
TWI60G0311 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 3.1e-12 78.6 113 44.2
Glyma.02G246100 Glycine max HOM05D000611 ORTHO05D004334 4.1e-12 78.2 293 28.7
DCAR_025872 Daucus carota HOM05D000611 ORTHO05D004334 7.0e-12 77.4 258 28.3
Lj6g0006818 Lotus japonicus HOM05D000611 ORTHO05D004334 9.1e-12 77.0 253 28.1
Solyc03g118950.3 Solanum lycopersicum HOM05D000611 ORTHO05D004334 1.6e-11 76.3 204 30.4
ECA232G4037 Erigeron canadensis HOM05D000611 ORTHO05D004334 5.9e-11 74.3 254 26.8
Medtr4g007820 Medicago truncatula HOM05D000611 ORTHO05D004334 5.9e-11 74.3 98 41.8
Ca_05862_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 7.7e-11 73.9 104 44.2
HPP92_009716 Vanilla planifolia HOM05D000611 ORTHO05D004334 7.7e-11 73.9 110 38.2
Gorai.006G056800 Gossypium raimondii HOM05D000611 ORTHO05D004334 1.0e-10 73.6 98 44.9
Rhsim03G0037200 Rhododendron simsii HOM05D000611 ORTHO05D004334 1.0e-10 73.6 73 50.7
Rhsim08G0147400 Rhododendron simsii HOM05D000611 ORTHO05D004334 1.0e-10 73.6 109 44.0
Sp6g36120 Schrenkiella parvula HOM05D000611 ORTHO05D004334 1.0e-10 73.6 226 29.2
Psat2g041880 Pisum sativum HOM05D000611 ORTHO05D004334 1.3e-10 73.2 94 43.6
VMungo1309G0330 Vigna mungo HOM05D000611 ORTHO05D007148 1.3e-10 73.2 207 29.0
Lj2g0020896 Lotus japonicus HOM05D000611 ORTHO05D004334 1.7e-10 72.8 223 28.7
PSO210G3124 Papaver somniferum HOM05D000611 ORTHO05D004334 2.2e-10 72.4 171 34.5
Phvul.009G036100 Phaseolus vulgaris HOM05D000611 ORTHO05D007148 2.2e-10 72.4 207 28.5
vmacro17597 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.9e-10 72.0 179 31.8
Lalb_Chr11g0075021 Lupinus albus HOM05D000611 ORTHO05D004334 3.8e-10 71.6 217 30.4
TPR.G6365 Trifolium pratense HOM05D000611 ORTHO05D007148 5.0e-10 71.2 219 30.1
Gohir.D06G041233 Gossypium hirsutum HOM05D000611 ORTHO05D004334 8.5e-10 70.5 108 38.9
Solyc02g091460.3 Solanum lycopersicum HOM05D000611 ORTHO05D004334 8.5e-10 70.5 71 54.9
DCAR_014728 Daucus carota HOM05D000080 ORTHO05D000053 1.5e-09 69.7 221 29.9
Psat5g049240 Pisum sativum HOM05D000611 ORTHO05D007148 1.5e-09 69.7 220 29.1
CARHR206460 Cardamine hirsuta HOM05D000611 ORTHO05D004334 1.9e-09 69.3 229 29.3
GSVIVG01009189001 Vitis vinifera HOM05D000611 ORTHO05D007148 1.9e-09 69.3 211 27.5
Ciclev10010802m.g Citrus clementina HOM05D000611 ORTHO05D004334 3.2e-09 68.6 70 54.3
HPP92_011381 Vanilla planifolia HOM05D000611 ORTHO05D007148 3.2e-09 68.6 205 30.2
Zm00001eb042470 Zea mays HOM05D000611 ORTHO05D004334 3.2e-09 68.6 274 28.1
Lj2g0007530 Lotus japonicus HOM05D000611 ORTHO05D004334 4.2e-09 68.2 213 29.6
Cc04_g06500 Coffea canephora HOM05D000611 ORTHO05D004334 5.5e-09 67.8 226 28.3
Lalb_Chr02g0154471 Lupinus albus HOM05D000611 ORTHO05D004334 9.4e-09 67.0 68 50.0
Actinidia27007 Actinidia chinensis HOM05D000611 ORTHO05D004334 1.2e-08 66.6 114 40.4
PGSC0003DMG400005652 Solanum tuberosum HOM05D000611 ORTHO05D004334 1.2e-08 66.6 177 31.6
Lsat_1_v5_gn_1_1860 Lactuca sativa HOM05D000611 ORTHO05D007148 1.6e-08 66.2 216 27.8
Glyma.18G266333 Glycine max HOM05D000611 ORTHO05D004334 2.7e-08 65.5 160 31.2
PSO063G3558 Papaver somniferum HOM05D000611 ORTHO05D004334 2.7e-08 65.5 211 27.5
HanXRQChr02g0046201 Helianthus annuus HOM05D000611 ORTHO05D007148 3.6e-08 65.1 208 28.8
Phvul.001G231400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 3.6e-08 65.1 186 29.0
ATR0598G054 Amborella trichopoda HOM05D000611 ORTHO05D004334 4.7e-08 64.7 93 43.0
ClCG08G011620 Citrullus lanatus HOM05D000611 ORTHO05D007148 4.7e-08 64.7 207 29.5
DCAR_002572 Daucus carota HOM05D000611 ORTHO05D004334 8.0e-08 63.9 102 39.2
Gohir.D09G052906 Gossypium hirsutum HOM05D000611 ORTHO05D004334 1.0e-07 63.5 139 33.1
Os05g0307400 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D007148 1.0e-07 63.5 206 27.7
ATR0598G265 Amborella trichopoda HOM05D000611 ORTHO05D004334 1.4e-07 63.2 87 40.2
Prupe.1G533300 Prunus persica HOM05D000611 ORTHO05D007148 1.4e-07 63.2 215 27.4
CANSAT21G1807 Cannabis sativa HOM05D000611 ORTHO05D007148 1.8e-07 62.8 207 27.1
PGSC0003DMG400035218 Solanum tuberosum HOM05D000611 ORTHO05D004334 1.8e-07 62.8 222 28.8
vmacro14435 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 1.8e-07 62.8 245 28.2
CsaV3_2G030190 Cucumis sativus L. HOM05D000809 ORTHO05D007148 2.3e-07 62.4 207 29.0
Os08g0384100 Oryza sativa ssp. japonica HOM05D000611 ORTHO05D004334 2.3e-07 62.4 122 34.4
EL10Ac9g22897 Beta vulgaris HOM05D000611 ORTHO05D004334 3.0e-07 62.0 262 26.3
CAN.G1129.18 Capsicum annuum HOM05D000611 ORTHO05D004334 3.0e-07 62.0 95 42.1
Peaxi162Scf00683g00137 Petunia axillaris HOM05D000611 ORTHO05D004334 4.0e-07 61.6 72 43.1
BraA10t45006Z Brassica rapa HOM05D000611 ORTHO05D004334 5.2e-07 61.2 92 47.8
TAR622G0324 Trochodendron aralioides HOM05D000611 ORTHO05D004334 5.2e-07 61.2 72 44.4
Lj4A87T46 Lonicera japonica HOM05D000611 ORTHO05D007148 8.8e-07 60.5 207 27.5
HanXRQChr01g0013841 Helianthus annuus HOM05D000611 ORTHO05D004334 1.2e-06 60.1 67 46.3
Lj1A1057G22 Lonicera japonica HOM05D000611 ORTHO05D000809 4.4e-06 58.2 207 25.6
Phvul.006G039700 Phaseolus vulgaris HOM05D000611 ORTHO05D000809 4.4e-06 58.2 242 25.2
Sed0014831 Sechium edule HOM05D000611 ORTHO05D007148 4.4e-06 58.2 213 28.6
Actinidia07138 Actinidia chinensis HOM05D000611 ORTHO05D000809 5.7e-06 57.8 199 26.6
Gohir.A09G052128 Gossypium hirsutum HOM05D000611 ORTHO05D004334 5.7e-06 57.8 77 48.1
QL06p023072 Quercus lobata HOM05D000611 ORTHO05D004334 5.7e-06 57.8 61 50.8
arahy.Tifrunner.gnm1.ann1.TS5TVQ Arachis hypogaea HOM05D000611 ORTHO05D004334 7.5e-06 57.4 163 28.2
Migut.D02443 Erythranthe guttata HOM05D000611 ORTHO05D189914 7.5e-06 57.4 203 26.1
FvH4_5g35180 Fragaria vesca HOM05D000611 ORTHO05D007148 7.5e-06 57.4 219 26.9
FAN08G1902 Fragaria x ananassa HOM05D000611 ORTHO05D007148 7.5e-06 57.4 219 27.4
FAN18G2075 Fragaria x ananassa HOM05D000611 ORTHO05D007148 7.5e-06 57.4 219 27.4
RcHm_v2.0_Chr7g0236301 Rosa chinensis HOM05D000611 ORTHO05D007148 7.5e-06 57.4 207 26.1
Phvul.011G009300 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 9.8e-06 57.0 70 44.3


User provided reference genes

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