Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 2.8e-70 268.5 134 100.0
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 1.1e-42 176.8 118 70.3
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 1.5e-34 149.8 100 74.0
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.7e-30 136.3 120 57.5
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 3.7e-30 135.2 110 60.0
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 1.9e-29 132.9 119 53.8
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 9.2e-29 130.6 118 54.2
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 2.0e-28 129.4 101 60.4
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 4.6e-28 128.3 104 58.7
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 7.8e-28 127.5 95 58.9
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 1.3e-27 126.7 108 55.6
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 1.7e-27 126.3 101 59.4
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 6.6e-27 124.4 95 62.1
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 1.6e-25 119.8 114 49.1
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 4.7e-25 118.2 105 51.4
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 4.7e-25 118.2 95 57.9
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 4.7e-25 118.2 98 54.1
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 6.2e-25 117.9 109 53.2
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 6.2e-25 117.9 108 54.6
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 1.4e-24 116.7 99 56.6
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 1.4e-24 116.7 101 52.5
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 1.8e-24 116.3 100 55.0
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 2.3e-24 115.9 117 50.4
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 2.3e-24 115.9 109 48.6
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 3.1e-24 115.5 81 65.4
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 4.0e-24 115.2 101 51.5
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 5.2e-24 114.8 95 60.0
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 5.2e-24 114.8 95 55.8
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 5.2e-24 114.8 95 55.8
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 5.2e-24 114.8 101 51.5
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 5.2e-24 114.8 103 53.4
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 6.8e-24 114.4 82 64.6
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 6.8e-24 114.4 82 64.6
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 6.8e-24 114.4 106 50.0
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 2.0e-23 112.8 75 68.0
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 2.6e-23 112.5 100 54.0
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 5.8e-23 111.3 93 57.0
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 1.3e-22 110.2 103 48.5
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 1.7e-22 109.8 95 54.7
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 2.9e-22 109.0 85 56.5
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 3.7e-22 108.6 93 55.9
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 3.2e-21 105.5 94 53.2
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 5.4e-21 104.8 98 49.0
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 9.2e-21 104.0 100 48.0
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 2.7e-20 102.4 88 55.7
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 4.6e-20 101.7 122 41.8
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 4.6e-20 101.7 106 47.2
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 7.8e-20 100.9 91 53.8
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 7.8e-20 100.9 76 60.5
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 1.3e-19 100.1 110 50.0
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 1.3e-19 100.1 60 73.3
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 2.3e-19 99.4 101 48.5
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 3.0e-19 99.0 100 50.0
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 5.1e-19 98.2 110 43.6
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 5.6e-18 94.7 81 56.8
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 1.2e-17 93.6 69 63.8
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 1.6e-17 93.2 69 62.3
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 1.6e-17 93.2 68 64.7
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 1.6e-17 93.2 68 64.7
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 2.1e-17 92.8 106 45.3
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 2.1e-17 92.8 84 53.6
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 3.6e-17 92.0 49 75.5
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 4.7e-17 91.7 57 70.2
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 4.7e-17 91.7 112 42.9
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 1.1e-16 90.5 59 69.5
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 1.4e-16 90.1 60 65.0
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 2.3e-16 89.4 56 67.9
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 4.0e-16 88.6 87 48.3
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 1.2e-15 87.0 90 47.8
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 1.5e-15 86.7 49 71.4
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 3.4e-15 85.5 67 55.2
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 4.4e-15 85.1 54 64.8
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 3.7e-14 82.0 61 54.1
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 4.9e-14 81.6 61 60.7
AUR62013378 Chenopodium quinoa HOM05D007718 ORTHO05D009752 1.1e-13 80.5 65 64.6
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 1.9e-13 79.7 111 36.0
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 5.4e-13 78.2 98 37.8
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 1.2e-12 77.0 157 33.1
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 4.6e-12 75.1 111 37.8
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 1.7e-11 73.2 74 47.3
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 8.6e-11 70.9 71 49.3
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 2.5e-10 69.3 106 32.1
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 1.2e-09 67.0 79 38.0
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 1.6e-09 66.6 37 73.0
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 2.8e-09 65.9 50 60.0
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 6.2e-09 64.7 50 58.0
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 1.5e-07 60.1 36 69.4


User provided reference genes

Program Settings