Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 1.3e-235 819.3 406 100.0
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 4.0e-176 621.7 400 76.5
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 1.0e-107 394.4 392 51.3
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 8.8e-107 391.3 395 50.6
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 4.3e-106 389.0 398 49.2
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 7.4e-106 388.3 386 51.3
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 4.1e-104 382.5 394 50.3
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 5.3e-104 382.1 395 50.6
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 9.1e-104 381.3 399 49.1
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 1.2e-103 380.9 395 48.4
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 2.2e-102 376.7 405 49.1
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 5.0e-102 375.6 373 51.2
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 1.1e-101 374.4 386 48.7
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 1.2e-100 370.9 390 49.2
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.6e-100 370.5 358 52.8
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 7.9e-100 368.2 385 47.8
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 1.4e-99 367.5 367 51.8
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 3.0e-99 366.3 373 49.3
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 2.8e-97 359.8 398 46.7
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 4.8e-97 359.0 399 46.9
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 8.2e-97 358.2 385 48.1
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.4e-96 356.7 385 48.6
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 2.4e-96 356.7 403 46.2
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 5.3e-96 355.5 387 47.5
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 5.3e-96 355.5 350 50.3
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 5.3e-96 355.5 379 49.1
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.5e-95 354.0 368 49.5
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 2.6e-95 353.2 377 48.8
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 5.0e-94 349.0 389 47.0
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 6.5e-94 348.6 345 49.6
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 1.4e-93 347.4 361 48.8
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 4.2e-93 345.9 378 48.4
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 7.2e-93 345.1 338 51.2
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 1.1e-90 337.8 391 45.5
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 2.8e-89 333.2 356 48.9
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 2.8e-89 333.2 393 43.3
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 1.0e-86 324.7 340 48.5
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 5.0e-86 322.4 379 45.1
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 2.5e-85 320.1 300 53.7
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 4.2e-85 319.3 389 43.4
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 8.0e-84 315.1 367 47.1
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 1.4e-83 314.3 454 39.6
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 2.6e-82 310.1 288 53.8
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 5.3e-80 302.4 334 47.0
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 3.8e-78 296.2 302 49.7
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 9.4e-77 291.6 298 51.7
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 6.1e-76 288.9 338 43.5
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 3.7e-73 279.6 375 43.2
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 7.0e-72 275.4 301 46.2
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 4.7e-68 262.7 264 48.5
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 4.9e-65 252.7 269 49.8
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 9.2e-64 248.4 263 46.8
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 4.5e-63 246.1 263 49.4
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 2.5e-53 213.8 286 43.4
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 8.0e-52 208.8 231 45.5
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 9.9e-42 175.3 330 33.6
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 2.5e-37 160.6 258 36.0
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 1.3e-33 148.3 278 35.3
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 2.7e-31 140.6 167 44.3
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 4.6e-31 139.8 114 55.3
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 4.6e-31 139.8 114 56.1
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 4.6e-31 139.8 118 51.7
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 3.9e-22 110.2 125 45.6
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 2.0e-18 97.8 82 51.2
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 2.3e-14 84.3 316 23.7
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 2.3e-14 84.3 336 22.0
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 2.3e-14 84.3 333 22.8
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 3.9e-14 83.6 348 21.8
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 1.1e-13 82.0 332 22.3
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 1.3e-12 78.6 336 22.0
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 1.6e-12 78.2 346 21.7
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 3.7e-12 77.0 339 21.8
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 6.2e-12 76.3 332 22.3
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 8.1e-12 75.9 358 21.2
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 1.1e-11 75.5 341 22.6
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 1.4e-11 75.1 332 21.4
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 1.8e-11 74.7 393 20.6
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 4.0e-11 73.6 360 23.1
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 4.0e-11 73.6 415 22.4
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 5.3e-11 73.2 333 22.5
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 5.3e-11 73.2 332 22.3
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 5.3e-11 73.2 341 21.4
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 5.3e-11 73.2 415 22.2
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 5.3e-11 73.2 332 21.4
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 6.9e-11 72.8 348 22.7
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 6.9e-11 72.8 372 22.8
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 6.9e-11 72.8 343 23.0
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 9.0e-11 72.4 337 22.3
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 9.0e-11 72.4 331 22.1
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 1.2e-10 72.0 315 22.5
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 1.5e-10 71.6 340 23.5
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 1.5e-10 71.6 367 22.6
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 1.5e-10 71.6 367 22.6
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 2.0e-10 71.2 350 22.6
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 3.4e-10 70.5 359 22.3
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 3.4e-10 70.5 336 22.0
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 3.4e-10 70.5 383 22.2
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 4.5e-10 70.1 334 21.9
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 5.8e-10 69.7 337 21.4
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 5.8e-10 69.7 332 20.8
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 7.6e-10 69.3 332 21.1
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 7.6e-10 69.3 114 37.7
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 1.0e-09 68.9 374 21.1
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.0e-09 68.9 337 21.1
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 1.0e-09 68.9 418 20.8
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.3e-09 68.6 337 20.8
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 1.3e-09 68.6 368 21.2
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 1.3e-09 68.6 400 22.0
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.3e-09 68.6 279 22.9
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 1.7e-09 68.2 369 22.5
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.7e-09 68.2 335 21.8
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 2.2e-09 67.8 350 22.0
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 2.9e-09 67.4 335 21.8
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 2.9e-09 67.4 372 23.1
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 3.8e-09 67.0 332 22.9
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 4.9e-09 66.6 355 21.7
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 4.9e-09 66.6 334 21.0
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 4.9e-09 66.6 336 21.1
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 4.9e-09 66.6 355 21.4
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 8.4e-09 65.9 337 20.2
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 1.1e-08 65.5 334 22.2
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 1.4e-08 65.1 279 22.6
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 1.9e-08 64.7 294 22.1
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 2.5e-08 64.3 334 20.4
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 4.2e-08 63.5 389 22.9
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 9.3e-08 62.4 338 21.9
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 1.2e-07 62.0 332 20.5
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 2.1e-07 61.2 287 24.0
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 2.1e-07 61.2 49 51.0
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 2.7e-07 60.8 259 23.2
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 8.7e-06 55.8 120 28.3


User provided reference genes

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