Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 7.6e-144 513.8 264 100.0
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.7e-114 416.4 236 86.4
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.4e-105 386.7 243 80.7
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 3.7e-98 362.1 235 74.0
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 6.3e-98 361.3 235 72.8
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 2.0e-96 356.3 235 72.8
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.9e-95 352.4 233 70.8
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.1e-94 350.5 235 72.8
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 4.2e-94 348.6 235 71.1
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 9.4e-94 347.4 235 72.3
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.6e-93 346.7 235 72.3
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 1.6e-93 346.7 237 75.1
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 2.7e-93 345.9 252 67.5
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 3.6e-93 345.5 225 72.0
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 6.1e-93 344.7 234 69.7
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 8.0e-93 344.4 233 70.0
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.4e-92 343.6 235 71.1
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 4.0e-92 342.0 235 70.6
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 6.8e-92 341.3 236 68.2
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 1.2e-91 340.5 234 68.8
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.5e-91 340.1 234 68.8
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.0e-91 339.7 234 70.1
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 3.4e-91 339.0 234 69.7
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 7.5e-91 337.8 235 68.9
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 9.8e-91 337.4 234 69.2
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.2e-90 336.3 238 68.1
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 2.8e-90 335.9 234 68.4
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 3.7e-90 335.5 236 67.4
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 4.8e-90 335.1 234 69.7
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 8.3e-90 334.3 234 69.7
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.4e-89 333.6 235 68.5
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 1.6e-88 330.1 236 67.4
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 2.7e-88 329.3 235 66.4
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 3.5e-88 328.9 229 69.0
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 4.5e-88 328.6 212 72.6
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 4.5e-88 328.6 233 67.0
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 7.7e-88 327.8 229 68.1
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.3e-87 327.0 229 67.7
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.7e-87 326.6 232 69.0
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.7e-87 326.6 241 67.2
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.7e-87 326.6 221 71.5
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 5.0e-87 325.1 232 68.5
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 8.5e-87 324.3 222 68.0
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 8.5e-87 324.3 234 68.4
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.5e-86 323.6 223 68.6
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.5e-86 323.6 235 68.1
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.5e-86 322.8 223 75.3
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 4.2e-86 322.0 234 67.5
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 4.2e-86 322.0 229 69.0
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 1.6e-85 320.1 223 69.5
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.7e-85 319.3 237 66.2
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 4.7e-85 318.5 220 67.7
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 8.0e-85 317.8 236 66.1
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 3.0e-84 315.8 234 67.1
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 8.8e-84 314.3 236 64.4
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 1.2e-83 313.9 213 69.0
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 1.2e-83 313.9 229 68.1
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 1.5e-83 313.5 235 65.1
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 2.0e-83 313.2 225 66.2
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 2.6e-83 312.8 238 63.9
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 2.8e-82 309.3 241 64.3
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 3.7e-82 308.9 236 63.6
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.1e-81 307.4 232 65.9
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 1.4e-81 307.0 225 65.3
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 1.8e-81 306.6 239 64.0
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 5.4e-81 305.1 227 64.8
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.2e-80 303.9 239 61.9
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 2.7e-80 302.8 236 61.9
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 7.7e-80 301.2 228 63.2
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 1.0e-79 300.8 231 62.3
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 2.3e-79 299.7 236 61.4
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 2.9e-79 299.3 236 61.4
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 3.8e-79 298.9 236 60.6
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 6.6e-79 298.1 236 61.4
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 6.6e-79 298.1 236 61.4
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 6.6e-79 298.1 236 61.4
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 1.5e-78 297.0 225 65.8
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 4.3e-78 295.4 238 60.5
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 4.3e-78 295.4 236 61.0
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 5.6e-78 295.0 227 62.6
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.6e-77 293.5 237 60.3
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 2.1e-77 293.1 228 60.5
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 2.1e-77 293.1 228 61.4
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.4e-76 290.4 220 62.3
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 4.0e-76 288.9 237 59.9
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 5.7e-75 285.0 222 64.0
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 7.5e-75 284.6 223 62.3
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.3e-74 283.9 207 66.2
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 3.7e-74 282.3 236 58.5
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 1.4e-73 280.4 229 61.1
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.2e-72 277.3 213 62.4
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 2.7e-72 276.2 233 59.7
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 3.5e-72 275.8 220 60.0
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 7.0e-65 251.5 266 49.2
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 5.2e-60 235.3 199 61.8
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 8.3e-58 228.0 151 71.5
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.4e-57 227.3 235 49.8
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.4e-57 226.5 155 66.5
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 4.7e-45 185.7 138 60.9
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 4.0e-44 182.6 149 59.1
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 5.2e-44 182.2 210 40.5
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 3.4e-43 179.5 234 40.2
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 5.4e-41 172.2 237 43.9
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 1.2e-40 171.0 227 39.6
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 4.6e-40 169.1 157 53.5
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 3.1e-36 156.4 231 35.1
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 5.8e-35 152.1 230 35.2
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 4.2e-33 146.0 217 35.5
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 3.5e-32 142.9 118 58.5
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 4.6e-32 142.5 166 46.4
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 5.6e-30 135.6 91 72.5
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 5.3e-28 129.0 110 57.3
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.1e-24 117.1 84 63.1
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.5e-19 100.9 216 31.0
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 4.1e-12 76.3 70 54.3
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 4.1e-12 76.3 70 54.3
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 6.1e-08 62.4 41 65.9
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 7.9e-08 62.0 42 64.3


User provided reference genes

Program Settings