Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 5.4e-102 374.4 197 100.0
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.1e-70 270.4 197 78.7
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 6.6e-68 261.2 193 76.7
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 1.5e-67 260.0 181 76.2
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 6.4e-63 244.6 182 74.7
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 1.1e-62 243.8 191 70.7
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 1.9e-62 243.0 177 74.0
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.4e-62 242.7 182 73.6
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 3.2e-62 242.3 197 71.6
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 4.2e-62 241.9 180 71.1
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 4.2e-62 241.9 180 73.3
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 5.4e-62 241.5 184 71.7
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 9.3e-62 240.7 181 72.4
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 9.3e-62 240.7 180 71.1
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.7e-61 239.2 184 70.1
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 3.5e-61 238.8 181 69.6
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 7.8e-61 237.7 195 67.7
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 7.8e-61 237.7 186 70.4
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 1.3e-60 236.9 183 73.2
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 1.3e-60 236.9 178 72.5
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 1.7e-60 236.5 182 72.0
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 3.0e-60 235.7 180 74.4
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 3.0e-60 235.7 180 74.4
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 5.1e-60 235.0 179 74.3
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 6.6e-60 234.6 185 71.4
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 1.1e-59 233.8 177 70.1
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 7.3e-59 231.1 190 66.3
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 9.6e-59 230.7 181 71.8
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 8.1e-58 227.6 183 67.2
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.1e-57 227.3 184 67.4
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 1.1e-57 227.3 183 67.8
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 3.1e-57 225.7 191 66.0
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 3.1e-57 225.7 171 69.6
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 5.3e-57 224.9 177 68.4
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 5.3e-57 224.9 180 70.6
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 5.3e-57 224.9 161 74.5
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 1.2e-56 223.8 192 66.1
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 1.2e-56 223.8 192 65.6
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 1.5e-56 223.4 179 68.2
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 2.6e-56 222.6 192 65.1
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 3.4e-56 222.2 186 65.1
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 4.5e-56 221.9 195 66.2
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 5.8e-56 221.5 176 66.5
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 5.8e-56 221.5 180 67.2
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 1.7e-55 219.9 180 65.6
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 1.7e-55 219.9 194 65.5
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 2.2e-55 219.5 179 72.1
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 2.9e-55 219.2 195 62.6
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 3.8e-55 218.8 171 67.3
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 3.8e-55 218.8 177 67.2
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 4.9e-55 218.4 190 66.8
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.4e-54 216.9 192 63.0
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 2.4e-54 216.1 184 63.6
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 9.3e-54 214.2 178 66.3
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 2.1e-53 213.0 179 65.9
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 2.1e-53 213.0 180 65.0
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.1e-53 213.0 192 64.6
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 2.1e-53 213.0 203 59.6
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 2.7e-53 212.6 198 62.6
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 4.6e-53 211.8 180 65.0
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 4.6e-53 211.8 188 65.4
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 4.6e-53 211.8 180 65.6
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 6.0e-53 211.5 188 62.8
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 7.9e-53 211.1 170 68.8
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 7.9e-53 211.1 180 67.8
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 7.9e-53 211.1 176 66.5
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.0e-52 210.7 204 59.8
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 1.3e-52 210.3 180 63.9
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 1.3e-52 210.3 179 65.4
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 1.3e-52 210.3 172 65.1
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 3.0e-52 209.1 190 63.2
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 3.0e-52 209.1 113 92.9
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 3.0e-52 209.1 188 62.8
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.9e-52 208.8 155 74.8
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 5.1e-52 208.4 113 92.9
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 1.1e-51 207.2 185 63.8
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.9e-51 206.5 168 69.0
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.9e-51 206.5 189 63.0
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 2.5e-51 206.1 168 68.5
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 5.6e-51 204.9 175 65.7
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 9.6e-51 204.1 181 64.6
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.3e-50 203.8 125 81.6
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 3.7e-50 202.2 199 59.8
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 4.8e-50 201.8 191 60.2
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 4.8e-50 201.8 189 61.4
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 8.1e-50 201.1 173 69.9
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.8e-49 199.9 179 61.5
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 5.3e-49 198.4 113 87.6
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 6.9e-49 198.0 204 56.9
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 1.5e-48 196.8 112 88.4
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.0e-48 196.4 187 61.0
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 1.0e-47 194.1 187 60.4
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.0e-47 194.1 245 51.4
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 2.9e-47 192.6 113 83.2
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 3.8e-47 192.2 159 66.0
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.4e-46 190.3 182 63.7
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 1.9e-46 189.9 179 60.3
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 1.2e-45 187.2 165 60.6
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.6e-45 186.8 185 61.6
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 3.5e-45 185.7 147 69.4
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 6.0e-45 184.9 118 74.6
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 7.9e-45 184.5 118 81.4
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 7.9e-45 184.5 161 65.2
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 7.9e-45 184.5 112 79.5
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 8.7e-44 181.0 162 63.6
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 9.0e-41 171.0 145 65.5
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 9.0e-41 171.0 162 62.3
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 6.1e-37 158.3 161 59.6
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 1.1e-35 154.1 98 81.6
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 4.3e-35 152.1 88 83.0
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 7.4e-35 151.4 92 76.1
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 6.3e-34 148.3 92 75.0
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 8.2e-34 147.9 92 78.3
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 5.3e-33 145.2 109 61.5
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 1.3e-31 140.6 146 53.4
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 3.8e-31 139.0 70 94.3
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 7.2e-30 134.8 152 59.2
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.1e-29 133.3 166 45.2
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.3e-28 129.8 90 67.8
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 3.0e-28 129.4 70 85.7
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.1e-27 127.5 101 59.4
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 2.8e-26 122.9 94 61.7
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 4.8e-26 122.1 138 55.8
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 4.8e-26 122.1 97 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 6.5e-23 111.7 90 61.1
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 2.7e-21 106.3 109 48.6
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 3.7e-18 95.9 92 53.3
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.9e-07 59.7 85 34.1


User provided reference genes

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