Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01043 Beta vulgaris HOM05D005203 ORTHO05D006383 1.2e-45 186.0 87 100.0
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 2.7e-13 78.6 36 83.3
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 6.0e-13 77.4 37 83.8
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 1.0e-12 76.6 36 80.6
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 2.3e-12 75.5 32 90.6
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 3.0e-12 75.1 34 85.3
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 3.9e-12 74.7 32 90.6
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 3.9e-12 74.7 33 87.9
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 6.6e-12 73.9 32 87.5
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 8.7e-12 73.6 36 77.8
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 8.7e-12 73.6 31 93.5
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 1.1e-11 73.2 31 90.3
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 1.1e-11 73.2 31 90.3
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 1.1e-11 73.2 31 90.3
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.5e-11 72.8 45 71.1
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 1.5e-11 72.8 31 90.3
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 1.5e-11 72.8 32 90.6
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 1.9e-11 72.4 31 90.3
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 1.9e-11 72.4 31 90.3
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 1.9e-11 72.4 31 90.3
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.5e-11 72.0 31 90.3
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 2.5e-11 72.0 31 90.3
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 2.5e-11 72.0 31 90.3
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 2.5e-11 72.0 31 90.3
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 2.5e-11 72.0 31 90.3
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 2.5e-11 72.0 31 90.3
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 3.3e-11 71.6 31 90.3
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 4.3e-11 71.2 31 87.1
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.3e-11 71.2 31 87.1
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 4.3e-11 71.2 31 90.3
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 5.6e-11 70.9 31 90.3
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 5.6e-11 70.9 31 87.1
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 7.3e-11 70.5 31 90.3
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 7.3e-11 70.5 31 87.1
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 9.6e-11 70.1 31 87.1
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 1.3e-10 69.7 31 87.1
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 1.3e-10 69.7 31 83.9
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 1.6e-10 69.3 30 90.0
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.1e-10 68.9 31 87.1
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.1e-10 68.9 31 87.1
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 2.8e-10 68.6 31 83.9
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 1.4e-09 66.2 31 83.9
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.8e-09 65.9 32 81.2
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 3.1e-09 65.1 31 80.6
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 6.9e-09 63.9 31 77.4
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 9.0e-09 63.5 32 71.9
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 2.6e-08 62.0 33 72.7
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 4.4e-08 61.2 31 74.2
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 1.3e-07 59.7 31 77.4
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.3e-07 59.7 32 71.9
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 4.9e-07 57.8 40 62.5
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 6.4e-07 57.4 33 72.7
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.1e-06 56.6 27 85.2
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 1.1e-06 56.6 31 67.7
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 1.9e-06 55.8 47 55.3
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 1.9e-06 55.8 30 80.0
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.4e-06 55.5 38 68.4
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 3.2e-06 55.1 25 88.0
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 5.4e-06 54.3 24 91.7
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 5.4e-06 54.3 24 91.7
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 7.1e-06 53.9 31 71.0


User provided reference genes

Program Settings