Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 5.4e-59 230.7 111 100.0
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 5.2e-46 187.6 109 83.5
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 6.4e-44 180.6 117 76.9
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 3.6e-39 164.9 111 72.1
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 3.4e-37 158.3 114 67.5
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 4.5e-37 157.9 106 71.7
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 5.8e-37 157.5 105 68.6
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 5.8e-37 157.5 105 68.6
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 9.9e-37 156.8 104 71.2
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.3e-36 156.4 106 68.9
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.3e-36 156.4 106 71.7
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 2.2e-36 155.6 106 67.9
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 2.2e-36 155.6 105 67.6
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 2.9e-36 155.2 105 66.7
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 6.4e-36 154.1 106 67.0
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 8.4e-36 153.7 106 68.9
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 8.4e-36 153.7 101 67.3
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 8.4e-36 153.7 106 67.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 8.4e-36 153.7 103 68.9
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.1e-35 153.3 103 69.9
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 1.4e-35 152.9 111 64.9
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 1.4e-35 152.9 105 69.5
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.4e-35 152.9 103 68.9
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.9e-35 152.5 106 65.1
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.9e-35 152.5 113 64.6
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 2.4e-35 152.1 101 66.3
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 3.2e-35 151.8 103 65.0
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 3.2e-35 151.8 112 65.2
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 3.2e-35 151.8 103 68.0
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 3.2e-35 151.8 104 67.3
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 4.2e-35 151.4 87 81.6
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 4.2e-35 151.4 103 67.0
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 5.4e-35 151.0 102 68.6
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 7.1e-35 150.6 109 63.3
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 9.3e-35 150.2 103 67.0
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 9.3e-35 150.2 110 65.5
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 1.2e-34 149.8 111 64.9
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.6e-34 149.4 103 65.0
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 2.1e-34 149.1 104 66.3
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 2.7e-34 148.7 103 68.0
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 2.7e-34 148.7 103 67.0
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 2.7e-34 148.7 105 65.7
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 3.5e-34 148.3 102 66.7
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 3.5e-34 148.3 104 65.4
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 3.5e-34 148.3 101 67.3
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 4.6e-34 147.9 103 67.0
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 4.6e-34 147.9 114 64.0
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 6.0e-34 147.5 103 65.0
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 6.0e-34 147.5 108 66.7
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 7.9e-34 147.1 106 66.0
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 1.3e-33 146.4 120 60.0
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.8e-33 146.0 107 64.5
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.8e-33 146.0 107 61.7
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.8e-33 146.0 103 67.0
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 1.8e-33 146.0 106 69.8
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 3.0e-33 145.2 100 65.0
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 3.0e-33 145.2 105 64.8
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.1e-33 144.4 107 62.6
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 5.1e-33 144.4 103 64.1
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 5.1e-33 144.4 108 64.8
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 6.7e-33 144.1 103 65.0
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 6.7e-33 144.1 117 60.7
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 6.7e-33 144.1 107 66.4
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 8.7e-33 143.7 108 65.7
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.1e-32 143.3 107 63.6
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-32 142.9 99 66.7
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-32 142.9 99 66.7
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-32 142.9 99 66.7
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.5e-32 142.9 103 65.0
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.9e-32 142.5 109 62.4
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 3.3e-32 141.7 106 62.3
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 3.3e-32 141.7 105 63.8
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 4.3e-32 141.4 103 64.1
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 5.6e-32 141.0 103 64.1
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 5.6e-32 141.0 103 67.0
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 7.4e-32 140.6 103 63.1
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 7.4e-32 140.6 103 63.1
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 7.4e-32 140.6 91 70.3
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.3e-31 139.8 101 64.4
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 2.1e-31 139.0 97 64.9
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 2.1e-31 139.0 106 65.1
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 2.1e-31 139.0 103 68.0
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.8e-31 138.7 105 61.9
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 2.8e-31 138.7 101 62.4
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.7e-31 138.3 108 60.2
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 3.7e-31 138.3 98 63.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 3.7e-31 138.3 94 69.1
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 4.8e-31 137.9 99 62.6
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 6.2e-31 137.5 107 60.7
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 6.2e-31 137.5 98 63.3
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 6.2e-31 137.5 98 63.3
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 8.1e-31 137.1 98 63.3
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 8.1e-31 137.1 98 63.3
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.1e-30 136.7 99 62.6
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.8e-30 136.0 107 59.8
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.3e-30 134.4 141 50.4
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 2.0e-29 132.5 98 62.2
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 4.9e-28 127.9 107 55.1
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.6e-26 122.9 87 67.8
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 6.0e-26 120.9 68 85.3
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 9.6e-24 113.6 68 75.0
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 2.8e-23 112.1 79 64.6
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.1e-22 110.2 82 62.2
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 5.3e-22 107.8 83 61.4
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 6.9e-22 107.5 105 48.6
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 1.5e-21 106.3 91 49.5
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 4.5e-21 104.8 98 49.0
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 3.2e-19 98.6 123 43.1
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 5.5e-19 97.8 74 66.2
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 7.1e-19 97.4 66 69.7
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 1.6e-18 96.3 76 63.2
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 1.6e-18 96.3 86 55.8
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 2.2e-15 85.9 94 43.6
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 5.3e-14 81.3 59 57.6
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 6.9e-14 80.9 98 45.9
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 5.9e-13 77.8 149 29.5
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 3.8e-12 75.1 64 57.8
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.8e-09 66.2 52 59.6


User provided reference genes

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