Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00970 Beta vulgaris HOM05D008009 ORTHO05D010177 3.5e-144 515.0 272 100.0
Ah.05g175960 Amaranthus hybridus HOM05D008009 ORTHO05D010177 9.4e-89 330.9 223 79.8
AUR62033371 Chenopodium quinoa HOM05D008009 ORTHO05D010177 4.1e-76 288.9 203 77.3
AUR62004286 Chenopodium quinoa HOM05D008009 ORTHO05D010177 9.1e-76 287.7 203 76.8
GSVIVG01027596001 Vitis vinifera HOM05D008009 ORTHO05D010177 9.4e-73 277.7 251 59.8
Sopen01g037620 Solanum pennellii HOM05D008009 ORTHO05D010177 4.7e-72 275.4 260 58.8
CAN.G170.56 Capsicum annuum HOM05D008009 ORTHO05D010177 8.0e-72 274.6 267 57.7
Solyc01g091850.3 Solanum lycopersicum HOM05D008009 ORTHO05D010177 1.8e-71 273.5 260 58.5
Eucgr.E00219 Eucalyptus grandis HOM05D008009 ORTHO05D010177 2.3e-71 273.1 258 57.8
PGSC0003DMG400000002 Solanum tuberosum HOM05D008009 ORTHO05D010177 2.6e-70 269.6 260 57.7
Peaxi162Scf00021g00312 Petunia axillaris HOM05D008009 ORTHO05D010177 5.7e-70 268.5 240 60.8
Potri.014G077600 Populus trichocarpa HOM05D008009 ORTHO05D010177 5.7e-70 268.5 261 55.9
MSTRG.17230 Avicennia marina HOM05D008009 ORTHO05D010177 7.5e-70 268.1 244 59.0
Haze_15234 Corylus avellana HOM05D008009 ORTHO05D010177 9.8e-70 267.7 242 59.5
Cfa021163 Carpinus fangiana HOM05D008009 ORTHO05D010177 1.1e-68 264.2 242 59.1
DCAR_006901 Daucus carota HOM05D008009 ORTHO05D010177 1.4e-68 263.8 258 57.4
PGR042G1113 Punica granatum HOM05D008009 ORTHO05D010177 3.1e-68 262.7 239 59.8
Cfa004175 Carpinus fangiana HOM05D008009 ORTHO05D010177 4.1e-68 262.3 242 58.3
Migut.B01680 Erythranthe guttata HOM05D008009 ORTHO05D010177 4.1e-68 262.3 240 57.5
ECA236G3590 Erigeron canadensis HOM05D008009 ORTHO05D010177 3.5e-67 259.2 242 58.7
Lsat_1_v5_gn_7_8101 Lactuca sativa HOM05D008009 ORTHO05D010177 5.9e-67 258.5 240 60.4
RcHm_v2.0_Chr1g0352071 Rosa chinensis HOM05D008009 ORTHO05D010177 1.7e-66 256.9 256 56.6
CANSAT56G2363 Cannabis sativa HOM05D008009 ORTHO05D010177 2.3e-66 256.5 269 55.4
Cc02_g37180 Coffea canephora HOM05D008009 ORTHO05D010177 2.3e-66 256.5 240 58.8
QL08p050750 Quercus lobata HOM05D008009 ORTHO05D010177 5.0e-66 255.4 268 54.5
Aqoxy5G03972 Aquilegia oxysepala HOM05D008009 ORTHO05D010177 6.6e-66 255.0 258 55.4
FAN01G0151 Fragaria x ananassa HOM05D008009 ORTHO05D010177 6.6e-66 255.0 258 56.2
FAN06G2831 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.1e-65 254.2 255 56.9
FvH4_7g12940 Fragaria vesca HOM05D008009 ORTHO05D010177 1.9e-65 253.4 255 56.9
FAN06G1824 Fragaria x ananassa HOM05D008009 ORTHO05D010177 3.3e-65 252.7 255 56.5
arahy.Tifrunner.gnm1.ann1.RW66HN Arachis hypogaea HOM05D008009 ORTHO05D010177 7.3e-65 251.5 239 57.7
FAN03G0554 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.6e-64 250.4 262 55.7
FAN10G4026 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.6e-64 250.4 258 55.8
SalBow3G1346 Salvia bowleyana HOM05D008009 ORTHO05D010177 2.8e-64 249.6 240 55.0
Actinidia27148 Actinidia chinensis HOM05D008009 ORTHO05D010177 6.1e-64 248.4 259 53.7
HanXRQChr06g0169381 Helianthus annuus HOM05D008009 ORTHO05D010177 6.1e-64 248.4 241 58.9
SGA_v2.0_scaffold95G28877 Striga asiatica HOM05D008009 ORTHO05D010177 1.4e-63 247.3 242 56.2
unitig_0.g1290 Utricularia gibba HOM05D008009 ORTHO05D010177 2.0e-62 243.4 255 52.9
Nitab4.5_0009025g0020 Nicotiana tabacum HOM05D002524 ORTHO05D002718 5.7e-62 241.9 239 58.2
Atru.chr5.397 Acer truncatum HOM05D008009 ORTHO05D010177 2.2e-61 240.0 254 54.7
Atru.chr5.391 Acer truncatum HOM05D008009 ORTHO05D010177 8.3e-61 238.0 254 54.3
SEGI_40209 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 1.4e-60 237.3 244 52.9
Lj1g0026011 Lotus japonicus HOM05D008009 ORTHO05D010177 1.8e-60 236.9 257 52.1
Medtr7g076320 Medicago truncatula HOM05D008009 ORTHO05D010177 5.4e-60 235.3 253 51.8
Glyma.18G228200 Glycine max HOM05D008009 ORTHO05D010177 1.6e-59 233.8 239 54.0
Ca_07869_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 2.7e-59 233.0 257 51.8
Ca_29748_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 2.7e-59 233.0 257 51.8
Nn6g34273 Nelumbo nucifera HOM05D008009 ORTHO05D010177 3.5e-59 232.6 240 52.5
VMungo1383G2711 Vigna mungo HOM05D008009 ORTHO05D010177 5.9e-59 231.9 258 51.9
Psat3g112360 Pisum sativum HOM05D008009 ORTHO05D010177 7.8e-59 231.5 254 50.8
Dinv43752 Davidia involucrata HOM05D008009 ORTHO05D010177 1.3e-58 230.7 222 59.9
Phvul.008G070000 Phaseolus vulgaris HOM05D008009 ORTHO05D010177 2.3e-58 229.9 253 52.2
Prupe.2G153700 Prunus persica HOM05D008009 ORTHO05D010177 8.9e-55 218.0 202 57.4
Nitab4.5_0006706g0010 Nicotiana tabacum HOM05D008009 ORTHO05D010177 2.0e-54 216.9 240 52.1
FAN10G1597 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.7e-53 213.8 258 50.0
Nitab4.5_0012175g0010 Nicotiana tabacum HOM05D002524 ORTHO05D002718 2.2e-53 213.4 210 54.3
Hma1.2p1_0033F.1_g020690 Hydrangea macrophylla HOM05D008009 ORTHO05D010177 2.4e-52 209.9 198 56.1
TPR.G37743 Trifolium pratense HOM05D008009 ORTHO05D010177 3.2e-52 209.5 252 46.8
Pp3c16_7270 Physcomitrium patens HOM05D008009 ORTHO05D010177 7.8e-51 204.9 257 45.5
Pp3c25_40 Physcomitrium patens HOM05D008009 ORTHO05D010177 4.3e-49 199.1 262 46.6
COL.COLO4_12632 Corchorus olitorius HOM05D008009 ORTHO05D010177 1.6e-48 197.2 245 47.3
Mapoly0089s0055 Marchantia polymorpha HOM05D008009 ORTHO05D010177 1.3e-45 187.6 296 41.6
arahy.Tifrunner.gnm1.ann1.EX28FW Arachis hypogaea HOM05D008009 ORTHO05D010177 1.9e-41 173.7 180 51.1
Gorai.004G156000 Gossypium raimondii HOM05D008009 ORTHO05D010177 7.3e-41 171.8 228 44.3
Gohir.D08G150200 Gossypium hirsutum HOM05D008009 ORTHO05D010177 1.6e-40 170.6 228 43.4
MCO11G458 Micromonas commoda HOM05D008009 ORTHO05D010177 1.1e-36 157.9 259 36.7
Gohir.A08G129000 Gossypium hirsutum HOM05D008009 ORTHO05D010177 2.4e-36 156.8 228 41.2
CiPaw.01G052300 Carya illinoinensis HOM05D008009 ORTHO05D010177 4.6e-35 152.5 242 41.7
Duzib133G0776 Durio zibethinus HOM05D008009 ORTHO05D010177 1.1e-31 141.4 178 42.7
PRCOL_00006926 Prasinoderma coloniale HOM05D008009 ORTHO05D010177 2.4e-23 113.6 231 32.5
MBI12_g11808_MAGBIO Magnolia biondii HOM05D008009 ORTHO05D010177 2.0e-22 110.5 87 70.1
Nn4g22699 Nelumbo nucifera HOM05D008009 ORTHO05D010177 2.0e-22 110.5 129 45.0
Thecc.01G369500 Theobroma cacao HOM05D008009 ORTHO05D010177 2.0e-22 110.5 217 35.9
SEGI_11444 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 3.1e-15 86.7 71 59.2
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 1.9e-09 67.4 225 28.0
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 1.9e-09 67.4 227 29.1
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 4.3e-09 66.2 226 26.1
Lsat_1_v5_gn_4_23500 Lactuca sativa HOM05D003797 ORTHO05D004370 5.6e-09 65.9 220 29.5
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 7.4e-09 65.5 219 28.8
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 1.3e-08 64.7 219 29.2
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 1.3e-08 64.7 220 28.2
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 1.6e-08 64.3 224 28.1
Carub.0005s0073 Capsella rubella HOM05D003797 ORTHO05D004370 2.1e-08 63.9 220 29.1
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 2.8e-08 63.5 224 27.2
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 2.8e-08 63.5 220 27.7
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 2.8e-08 63.5 220 30.0
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 3.7e-08 63.2 219 26.5
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 3.7e-08 63.2 220 28.6
SMO347G0454 Selaginella moellendorffii HOM05D002473 ORTHO05D002666 3.7e-08 63.2 193 28.0
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 8.1e-08 62.0 220 28.6
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 8.1e-08 62.0 220 27.7
Potri.010G104200 Populus trichocarpa HOM05D003797 ORTHO05D004370 8.1e-08 62.0 220 29.5
MBI19_g04825_MAGBIO Magnolia biondii HOM05D002473 ORTHO05D002666 1.1e-07 61.6 197 25.4
FvH4_4g33340 Fragaria vesca HOM05D003797 ORTHO05D004370 1.4e-07 61.2 219 28.3
AagrBONN_evm.TU.Sc2ySwM_344.2403 Anthoceros agrestis HOM05D002473 ORTHO05D002666 1.8e-07 60.8 205 26.8
Duzib251G0134 Durio zibethinus HOM05D003797 ORTHO05D004370 1.8e-07 60.8 220 26.8
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 1.8e-07 60.8 225 26.7
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.8e-07 60.8 219 27.4
LjContig00081g0026703 Lotus japonicus HOM05D003797 ORTHO05D004370 2.4e-07 60.5 220 28.2
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 3.1e-07 60.1 220 28.6
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 3.1e-07 60.1 220 28.6
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 3.1e-07 60.1 220 28.2
Phvul.002G322900 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 3.1e-07 60.1 220 28.2
RcHm_v2.0_Chr4g0442611 Rosa chinensis HOM05D003797 ORTHO05D004370 3.1e-07 60.1 244 28.3
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 3.1e-07 60.1 218 27.1
AUR62012750 Chenopodium quinoa HOM05D003797 ORTHO05D004370 4.0e-07 59.7 220 27.3
AUR62021908 Chenopodium quinoa HOM05D003797 ORTHO05D004370 4.0e-07 59.7 220 27.3
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 4.0e-07 59.7 224 28.1
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 4.0e-07 59.7 220 27.7
Phvul.002G322800 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 4.0e-07 59.7 205 28.8
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 4.0e-07 59.7 224 26.8
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 5.3e-07 59.3 223 27.4
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 5.3e-07 59.3 220 27.3
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 6.9e-07 58.9 244 27.9
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 6.9e-07 58.9 220 27.3
FAN07G0297 Fragaria x ananassa HOM05D003797 ORTHO05D004370 9.0e-07 58.5 247 27.9
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 9.0e-07 58.5 220 27.7
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 1.2e-06 58.2 220 26.8
FAN17G2298 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.2e-06 58.2 247 27.9
arahy.Tifrunner.gnm1.ann1.Q36DTI Arachis hypogaea HOM05D000005 ORTHO05D004370 1.5e-06 57.8 220 27.3
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 1.5e-06 57.8 220 26.8
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.5e-06 57.8 219 26.0
FAN22G2109 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.5e-06 57.8 247 27.9
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 2.0e-06 57.4 220 27.3
ATR0620G053 Amborella trichopoda HOM05D002473 ORTHO05D002666 2.0e-06 57.4 198 26.8
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea HOM05D003797 ORTHO05D004370 2.0e-06 57.4 220 27.3
Thecc.02G308100 Theobroma cacao HOM05D003797 ORTHO05D004370 2.0e-06 57.4 220 27.7
unitig_22.g5605 Utricularia gibba HOM05D003797 ORTHO05D004370 2.6e-06 57.0 225 26.2
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 2.6e-06 57.0 236 25.4
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 3.4e-06 56.6 220 28.2
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 4.5e-06 56.2 220 26.8
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 5.8e-06 55.8 251 26.7
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 5.8e-06 55.8 220 26.8
Lalb_Chr08g0239371 Lupinus albus HOM05D002473 ORTHO05D002666 7.6e-06 55.5 214 27.1


User provided reference genes

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