Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 1.2e-265 919.5 533 100.0
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 2.9e-49 200.7 165 64.2
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 7.8e-47 192.6 165 63.6
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 1.9e-40 171.4 165 55.2
AUR62013664 Chenopodium quinoa HOM05D056854 ORTHO05D044030 2.4e-35 154.5 234 44.9
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 3.1e-35 154.1 171 48.5
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 2.6e-34 151.0 144 52.8
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 9.9e-34 149.1 158 51.3
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 9.9e-34 149.1 144 54.9
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 3.8e-33 147.1 158 50.0
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 3.8e-33 147.1 163 52.1
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 1.9e-32 144.8 169 49.1
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 2.4e-32 144.4 160 51.2
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 2.4e-32 144.4 160 51.2
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 4.2e-32 143.7 165 49.7
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 1.2e-31 142.1 164 48.8
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 1.2e-31 142.1 142 52.1
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 1.6e-31 141.7 163 50.9
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 2.1e-31 141.4 178 46.6
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 3.5e-31 140.6 167 49.1
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 1.0e-30 139.0 146 50.0
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 1.8e-30 138.3 142 50.0
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 2.3e-30 137.9 163 50.9
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 2.3e-30 137.9 165 47.9
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 3.0e-30 137.5 144 53.5
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 5.1e-30 136.7 142 54.2
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 5.1e-30 136.7 141 51.8
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.5e-29 135.2 173 46.2
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 1.5e-29 135.2 167 48.5
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 1.9e-29 134.8 138 53.6
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 1.9e-29 134.8 159 47.2
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 2.5e-29 134.4 159 47.2
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 4.3e-29 133.7 143 46.9
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 5.6e-29 133.3 148 48.0
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 7.4e-29 132.9 147 47.6
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 7.4e-29 132.9 168 47.0
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 7.4e-29 132.9 158 49.4
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 9.6e-29 132.5 189 45.0
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 3.7e-28 130.6 93 63.4
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 3.7e-28 130.6 167 43.7
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.1e-27 129.0 163 46.0
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 1.4e-27 128.6 143 49.0
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.4e-27 128.6 161 45.3
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 1.8e-27 128.3 155 46.5
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 2.4e-27 127.9 154 46.1
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 6.9e-27 126.3 171 45.6
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 6.9e-27 126.3 171 45.6
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 6.9e-27 126.3 153 47.7
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 6.9e-27 126.3 160 42.5
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 9.0e-27 125.9 156 45.5
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 9.0e-27 125.9 156 45.5
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 9.0e-27 125.9 168 44.6
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 1.2e-26 125.6 148 48.0
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.2e-26 125.6 155 45.2
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 3.4e-26 124.0 152 45.4
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 4.5e-26 123.6 162 44.4
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 1.7e-25 121.7 168 46.4
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 2.2e-25 121.3 158 44.9
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 2.2e-25 121.3 168 43.5
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 3.8e-25 120.6 154 43.5
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 6.5e-25 119.8 156 44.2
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.4e-24 118.6 100 57.0
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 2.5e-24 117.9 151 43.7
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 2.5e-24 117.9 160 44.4
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 4.2e-24 117.1 169 43.2
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 5.5e-24 116.7 155 43.2
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.2e-23 115.5 166 43.4
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.2e-23 115.5 179 41.9
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 2.1e-23 114.8 121 55.4
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 6.0e-23 113.2 179 39.7
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 2.3e-22 111.3 138 45.7
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 3.9e-22 110.5 124 44.4
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 5.1e-22 110.2 127 45.7
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 6.7e-22 109.8 143 45.5
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 6.7e-22 109.8 102 50.0
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 6.7e-22 109.8 102 50.0
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 1.1e-21 109.0 162 42.6
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 1.5e-21 108.6 187 38.5
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 3.3e-21 107.5 169 39.1
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 4.3e-21 107.1 173 38.2
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 5.7e-21 106.7 105 50.5
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 9.6e-21 105.9 105 50.5
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 9.6e-21 105.9 105 50.5
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 9.6e-21 105.9 79 60.8
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 4.8e-20 103.6 179 34.6
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.1e-19 102.4 164 41.5
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 1.4e-19 102.1 181 40.9
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 3.1e-19 100.9 170 36.5
AUR62004167 Chenopodium quinoa HOM05D056854 ORTHO05D044030 4.1e-19 100.5 411 27.7
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.9e-19 99.8 215 32.6
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 6.9e-19 99.8 160 37.5
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 9.0e-19 99.4 130 45.4
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 9.0e-19 99.4 185 36.2
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.5e-18 98.6 161 41.6
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 2.0e-18 98.2 153 41.2
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 5.9e-18 96.7 143 43.4
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 5.0e-17 93.6 197 32.0
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 1.6e-15 88.6 187 29.9
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 2.1e-15 88.2 55 69.1
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 1.8e-14 85.1 138 39.9
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 3.9e-14 84.0 143 35.7
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 6.7e-14 83.2 144 38.2
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 1.3e-12 79.0 141 34.0
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 3.7e-12 77.4 160 34.4
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 6.9e-11 73.2 58 51.7
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 3.4e-10 70.9 111 34.2
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 6.1e-07 60.1 143 30.8
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 2.3e-06 58.2 91 39.6
SMO171G0115 Selaginella moellendorffii HOM05D000227 ORTHO05D004725 5.1e-06 57.0 64 42.2


User provided reference genes

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