Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 2.4e-139 498.8 250 100.0
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.7e-82 309.3 213 75.1
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 3.8e-76 288.9 194 74.7
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 8.4e-76 287.7 195 72.8
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 9.3e-75 284.3 207 69.6
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.2e-74 283.9 213 68.5
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 1.2e-74 283.9 213 68.5
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.6e-74 283.5 183 74.9
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 2.1e-74 283.1 194 72.2
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.6e-74 282.0 183 74.9
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 7.9e-74 281.2 206 68.9
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 7.9e-74 281.2 207 67.6
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 1.8e-73 280.0 183 74.3
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.8e-73 280.0 183 74.3
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 2.3e-73 279.6 181 75.1
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 2.3e-73 279.6 181 76.2
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 2.3e-73 279.6 196 74.5
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 3.9e-73 278.9 189 73.5
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 6.7e-73 278.1 183 73.8
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 8.7e-73 277.7 230 64.3
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.1e-72 277.3 182 72.5
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.1e-72 277.3 209 70.8
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.1e-72 277.3 183 73.8
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.1e-72 277.3 183 70.5
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 1.9e-72 276.6 242 59.1
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 7.4e-72 274.6 181 74.0
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 2.1e-71 273.1 175 77.7
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 2.8e-71 272.7 199 66.8
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 3.6e-71 272.3 181 72.9
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 4.8e-71 271.9 181 73.5
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 8.1e-71 271.2 181 74.0
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 8.1e-71 271.2 196 69.9
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.1e-70 270.8 189 69.8
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.1e-70 270.8 222 65.3
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.4e-70 270.4 181 74.6
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.8e-70 270.0 204 68.1
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 2.4e-70 269.6 225 63.1
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.4e-70 269.6 209 66.5
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 4.0e-70 268.9 180 73.3
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 4.0e-70 268.9 225 61.8
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 5.3e-70 268.5 182 72.0
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 6.9e-70 268.1 227 63.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 9.0e-70 267.7 191 69.1
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 9.0e-70 267.7 200 68.0
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.2e-69 267.3 180 72.2
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 3.4e-69 265.8 207 66.2
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 3.4e-69 265.8 226 61.1
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 5.8e-69 265.0 180 73.3
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 7.6e-69 264.6 212 65.6
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 1.3e-68 263.8 180 72.8
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.3e-68 263.8 188 68.1
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.7e-68 263.5 182 71.4
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 2.9e-68 262.7 226 61.1
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 2.9e-68 262.7 172 74.4
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 8.4e-68 261.2 214 65.4
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.1e-67 260.8 180 71.7
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.1e-67 260.8 226 61.1
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.4e-67 260.4 215 62.3
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.9e-67 260.0 180 71.7
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 4.2e-67 258.8 201 66.7
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 7.1e-67 258.1 183 67.8
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 2.1e-66 256.5 230 60.0
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 2.7e-66 256.1 180 72.8
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 4.6e-66 255.4 185 64.9
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 3.9e-65 252.3 181 71.3
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 5.1e-65 251.9 207 66.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 1.1e-64 250.8 220 60.5
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 3.3e-64 249.2 197 65.0
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 7.4e-64 248.1 204 62.7
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.6e-63 246.9 204 62.7
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 8.1e-63 244.6 181 66.9
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 1.1e-62 244.2 141 86.5
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.1e-62 244.2 204 62.7
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.8e-62 243.4 181 67.4
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.4e-62 243.0 186 65.1
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 3.1e-62 242.7 183 66.1
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 4.0e-62 242.3 181 66.3
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 4.0e-62 242.3 228 58.8
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 5.3e-62 241.9 239 57.7
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 9.0e-62 241.1 198 62.1
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 3.4e-61 239.2 181 65.2
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 4.9e-60 235.3 174 68.4
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 3.2e-59 232.6 196 60.2
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 5.5e-59 231.9 174 67.2
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.6e-55 220.3 276 47.1
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.0e-52 211.1 184 63.0
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 2.2e-52 209.9 151 73.5
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.2e-51 205.7 230 54.8
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 5.5e-51 205.3 125 78.4
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 5.5e-51 205.3 182 59.9
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.2e-50 204.1 230 54.8
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 3.0e-49 199.5 219 51.6
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 9.7e-48 194.5 196 56.6
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.3e-47 194.1 124 79.0
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 2.0e-45 186.8 180 57.2
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 6.5e-44 181.8 125 72.0
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 6.5e-44 181.8 181 55.8
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 6.5e-44 181.8 153 63.4
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.6e-42 176.0 116 75.0
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.0e-41 174.5 116 74.1
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 8.2e-39 164.9 155 55.5
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 6.9e-38 161.8 127 67.7
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 5.9e-37 158.7 110 75.5
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.0e-36 157.9 152 52.6
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.0e-36 157.9 101 79.2
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.0e-33 147.9 98 73.5
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.4e-33 147.5 158 48.1
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.3e-33 146.7 101 76.2
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 4.8e-31 139.0 102 67.6
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 3.8e-28 129.4 174 43.7
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 2.1e-26 123.6 89 64.0
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.3e-20 104.4 133 44.4
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 3.6e-18 96.3 168 36.3
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 9.1e-14 81.6 63 60.3
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 3.8e-12 76.3 58 62.1
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.5e-11 73.6 45 73.3
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 3.0e-09 66.6 67 44.8
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 6.8e-09 65.5 41 68.3
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 8.8e-09 65.1 63 50.8
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.7e-07 60.8 59 57.6
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.8e-07 60.1 50 58.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 4.1e-06 56.2 45 57.8


User provided reference genes

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