Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 1.4e-33 145.6 67 100.0
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 5.6e-27 123.6 63 84.1
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 1.6e-21 105.5 62 75.8
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 1.6e-21 105.5 64 76.6
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 4.6e-21 104.0 64 75.0
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 7.9e-21 103.2 60 76.7
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 1.3e-20 102.4 60 76.7
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 1.3e-20 102.4 60 75.0
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.8e-20 102.1 60 75.0
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.8e-20 102.1 64 73.4
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 3.0e-20 101.3 60 73.3
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 3.0e-20 101.3 62 72.6
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 5.1e-20 100.5 64 71.9
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 6.7e-20 100.1 60 75.0
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 6.7e-20 100.1 60 75.0
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 6.7e-20 100.1 62 72.6
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.1e-19 99.4 65 70.8
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 1.5e-19 99.0 60 71.7
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 1.5e-19 99.0 60 73.3
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.5e-19 99.0 60 73.3
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.9e-19 98.6 60 73.3
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.9e-19 98.6 60 73.3
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.9e-19 98.6 60 73.3
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.9e-19 98.6 60 73.3
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 2.5e-19 98.2 60 71.7
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 3.3e-19 97.8 60 73.3
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 71.7
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 71.7
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 71.7
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 71.7
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 71.7
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 70.0
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 70.0
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 5.6e-19 97.1 60 70.0
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 7.4e-19 96.7 59 72.9
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 7.4e-19 96.7 62 69.4
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 1.6e-18 95.5 60 70.0
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 1.6e-18 95.5 64 67.2
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 2.1e-18 95.1 60 68.3
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 2.1e-18 95.1 58 72.4
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 4.8e-18 94.0 58 74.1
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 4.8e-18 94.0 68 64.7
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 6.2e-18 93.6 54 75.9
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 6.2e-18 93.6 54 75.9
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 6.2e-18 93.6 70 62.9
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 1.1e-17 92.8 60 68.3
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 1.4e-17 92.4 62 66.1
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.8e-17 92.0 60 66.7
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 2.4e-17 91.7 60 68.3
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 6.9e-17 90.1 55 69.1
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 2.0e-16 88.6 59 62.7
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 2.6e-16 88.2 60 70.0
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 7.6e-16 86.7 61 57.4
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 7.6e-16 86.7 53 71.7
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 7.6e-16 86.7 53 71.7
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 1.6e-13 79.0 60 61.7
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 1.1e-11 72.8 56 55.4
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 4.3e-11 70.9 60 58.3
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 1.3e-10 69.3 41 70.7
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 1.6e-10 68.9 59 50.8
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 2.8e-10 68.2 52 57.7
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 3.7e-10 67.8 59 55.9
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 6.2e-10 67.0 58 55.2
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 9.0e-09 63.2 34 82.4
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.0e-08 62.0 60 53.3
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 2.0e-08 62.0 60 53.3
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 2.6e-08 61.6 62 51.6
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 2.6e-08 61.6 34 79.4
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 4.5e-08 60.8 34 76.5
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 7.6e-08 60.1 41 70.7
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 3.8e-07 57.8 56 50.0
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 4.9e-07 57.4 29 82.8
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 1.1e-06 56.2 29 86.2
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 2.5e-06 55.1 29 82.8
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 5.5e-06 53.9 29 79.3
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 7.1e-06 53.5 62 43.5
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 7.1e-06 53.5 37 62.2


User provided reference genes

Program Settings