Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 2.8e-91 338.6 171 100.0
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 5.2e-69 264.6 174 80.5
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 2.0e-68 262.7 174 80.5
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.2e-57 226.9 185 67.0
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 1.8e-29 133.3 167 47.9
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 2.4e-29 132.9 148 54.1
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 3.1e-29 132.5 157 51.0
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 6.9e-29 131.3 159 50.9
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 1.2e-28 130.6 172 44.8
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.4e-28 129.0 153 48.4
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 4.5e-28 128.6 171 46.8
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 9.9e-28 127.5 170 45.3
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 1.7e-27 126.7 164 46.3
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 1.7e-27 126.7 169 45.6
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 2.9e-27 125.9 162 44.4
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 4.9e-27 125.2 164 47.0
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 8.4e-27 124.4 151 47.0
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 1.1e-26 124.0 169 47.9
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.4e-26 123.6 151 47.0
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.9e-26 123.2 151 49.7
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 1.9e-26 123.2 165 43.6
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 7.1e-26 121.3 94 66.0
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 9.3e-26 120.9 151 43.7
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 9.3e-26 120.9 150 48.7
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 9.3e-26 120.9 164 42.1
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.2e-25 120.6 150 48.7
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.2e-25 120.6 161 41.6
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 1.6e-25 120.2 167 40.7
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 6.0e-25 118.2 155 47.1
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 6.0e-25 118.2 140 45.0
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 6.0e-25 118.2 168 44.0
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 3.0e-24 115.9 147 47.6
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 5.1e-24 115.2 161 43.5
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 6.7e-24 114.8 145 45.5
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 6.7e-24 114.8 146 42.5
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 1.1e-23 114.0 162 43.2
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 1.1e-23 114.0 163 44.8
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.1e-23 114.0 152 42.1
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 1.1e-23 114.0 180 38.9
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 1.5e-23 113.6 185 40.0
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 1.9e-23 113.2 167 44.3
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.9e-23 113.2 157 43.3
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 3.3e-23 112.5 153 48.4
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 7.4e-23 111.3 149 43.6
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 7.4e-23 111.3 146 46.6
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 7.4e-23 111.3 146 46.6
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 9.6e-23 110.9 151 43.0
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.3e-22 110.5 159 42.1
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.3e-22 110.5 146 44.5
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 2.1e-22 109.8 163 41.1
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 2.1e-22 109.8 156 44.2
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 3.7e-22 109.0 144 45.1
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 3.7e-22 109.0 167 43.7
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 4.8e-22 108.6 159 41.5
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 4.8e-22 108.6 141 42.6
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 6.2e-22 108.2 189 37.6
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 6.2e-22 108.2 150 42.7
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 8.1e-22 107.8 151 45.7
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 8.1e-22 107.8 155 40.0
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.1e-21 107.5 177 38.4
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.1e-21 107.5 177 38.4
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 1.1e-21 107.5 143 43.4
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.4e-21 107.1 155 45.8
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 1.4e-21 107.1 175 38.9
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 2.4e-21 106.3 177 40.7
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 2.4e-21 106.3 177 40.7
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 4.0e-21 105.5 177 40.7
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 4.0e-21 105.5 157 42.0
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 4.0e-21 105.5 164 41.5
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 9.0e-21 104.4 137 46.0
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 9.0e-21 104.4 135 42.2
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.2e-20 104.0 155 40.6
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 1.2e-20 104.0 164 40.2
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 1.5e-20 103.6 147 40.8
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 2.0e-20 103.2 151 40.4
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 2.6e-20 102.8 148 43.2
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 3.4e-20 102.4 166 41.6
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 7.6e-20 101.3 155 41.3
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.0e-19 100.9 163 38.7
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 1.0e-19 100.9 152 40.8
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.3e-19 100.5 167 39.5
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 1.7e-19 100.1 158 40.5
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 3.8e-19 99.0 151 41.1
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 3.8e-19 99.0 159 40.3
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 3.8e-19 99.0 159 37.1
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 6.5e-19 98.2 137 46.7
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 6.5e-19 98.2 166 37.3
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 8.4e-19 97.8 176 36.9
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.1e-18 97.4 145 42.8
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 1.1e-18 97.4 175 37.7
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 1.1e-18 97.4 151 37.1
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.9e-18 96.7 156 39.1
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.5e-18 96.3 155 39.4
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.5e-18 96.3 158 40.5
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 4.2e-18 95.5 189 33.9
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 4.2e-18 95.5 150 40.0
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 5.5e-18 95.1 174 36.8
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 5.5e-18 95.1 190 35.3
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 5.5e-18 95.1 157 38.9
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 9.3e-18 94.4 165 36.4
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 1.2e-17 94.0 159 39.0
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 2.7e-17 92.8 194 36.1
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 3.5e-17 92.4 166 39.8
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 6.0e-17 91.7 150 43.3
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 1.3e-16 90.5 149 40.3
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 1.3e-16 90.5 176 36.9
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.3e-16 90.5 182 34.6
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.3e-16 90.5 186 34.4
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 2.3e-16 89.7 174 36.2
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 3.9e-16 89.0 152 40.8
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 1.9e-15 86.7 186 33.3
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 5.7e-15 85.1 216 30.1
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 7.4e-15 84.7 162 35.2
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.6e-14 83.6 152 36.8
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 3.7e-14 82.4 76 59.2
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 6.2e-14 81.6 177 33.9
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.1e-13 80.9 198 28.8
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.4e-13 80.5 63 58.7
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 4.1e-13 79.0 187 31.0
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 1.5e-12 77.0 126 38.1
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 2.2e-11 73.2 125 36.0
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 2.9e-11 72.8 138 32.6
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 8.4e-11 71.2 151 37.1
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 1.1e-10 70.9 61 50.8
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 1.9e-10 70.1 135 35.6
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 1.2e-09 67.4 118 40.7
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 1.6e-09 67.0 137 35.8
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 2.1e-09 66.6 139 33.8
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 3.5e-09 65.9 87 41.4
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 3.5e-09 65.9 87 41.4
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 5.1e-08 62.0 137 32.1
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 1.5e-07 60.5 159 30.8
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 5.7e-07 58.5 111 35.1
Phvul.004G012300 Phaseolus vulgaris HOM05D005169 ORTHO05D006436 9.7e-07 57.8 158 30.4
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 3.7e-06 55.8 134 32.8


User provided reference genes

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