Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 8.5e-196 686.8 341 100.0
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.6e-136 489.2 318 76.4
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.7e-135 486.5 322 75.8
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 3.3e-107 392.5 321 62.0
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.4e-105 386.3 323 61.9
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 9.0e-105 384.4 323 61.6
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 9.0e-105 384.4 328 61.9
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.4e-103 378.3 324 60.5
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.4e-103 378.3 324 60.5
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 6.4e-103 378.3 321 60.7
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.2e-102 375.9 330 59.4
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.6e-101 373.6 333 58.3
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 7.9e-101 371.3 326 58.3
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 5.1e-100 368.6 341 58.9
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 1.9e-99 366.7 328 57.9
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.9e-99 366.7 326 58.9
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 2.5e-99 366.3 328 57.0
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 1.6e-98 363.6 327 57.8
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 3.7e-98 362.5 327 56.9
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 2.4e-97 359.8 327 57.2
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 3.1e-97 359.4 329 56.8
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.0e-97 359.0 321 57.0
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 4.0e-97 359.0 327 56.9
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.6e-96 356.3 321 57.0
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.6e-96 356.3 327 56.0
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 4.5e-96 355.5 321 56.7
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.0e-95 354.4 324 56.5
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 1.0e-95 354.4 320 56.9
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 1.0e-95 354.4 322 56.5
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.3e-95 354.0 321 56.4
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.3e-95 354.0 329 55.9
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.2e-95 353.2 301 61.1
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 2.2e-95 353.2 328 57.0
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 3.8e-95 352.4 328 55.8
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.9e-95 352.1 329 55.6
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 6.5e-95 351.7 325 56.3
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 6.5e-95 351.7 327 57.2
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 8.4e-95 351.3 321 57.0
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 8.4e-95 351.3 326 57.4
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.1e-94 350.9 321 57.3
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.4e-94 350.5 319 55.2
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.5e-94 349.7 334 55.4
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 3.2e-94 349.4 319 56.1
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.2e-93 347.4 327 54.7
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.6e-93 347.1 319 54.9
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 2.1e-93 346.7 322 55.9
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 2.7e-93 346.3 319 55.8
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 4.6e-93 345.5 317 57.1
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 6.0e-93 345.1 314 56.7
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.0e-92 344.4 327 55.4
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.0e-92 344.4 319 56.4
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.8e-92 343.6 330 56.1
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 2.3e-92 343.2 318 55.7
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.3e-92 343.2 319 54.2
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 5.1e-92 342.0 322 52.5
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 6.7e-92 341.7 330 56.1
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.1e-91 340.9 327 56.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 4.3e-91 339.0 327 55.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 4.3e-91 339.0 328 54.0
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.3e-90 337.4 329 54.7
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 8.2e-90 334.7 319 54.9
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 8.2e-90 334.7 329 53.2
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 2.4e-89 333.2 324 53.1
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 4.1e-89 332.4 327 53.2
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 4.1e-89 332.4 318 54.7
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.3e-89 332.0 330 54.2
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 5.3e-89 332.0 318 52.8
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 1.2e-88 330.9 259 65.3
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.7e-87 327.0 282 57.8
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.9e-87 326.2 343 49.9
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 5.0e-87 325.5 324 51.9
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 1.4e-86 323.9 330 52.4
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 3.2e-86 322.8 324 50.6
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 3.2e-86 322.8 327 53.8
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 5.5e-86 322.0 322 53.4
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 9.3e-86 321.2 326 51.2
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 4.6e-85 318.9 328 50.0
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 2.3e-84 316.6 315 50.8
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 3.0e-84 316.2 286 56.3
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 3.9e-84 315.8 333 49.5
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 5.1e-84 315.5 319 50.2
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 6.7e-84 315.1 324 49.4
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 6.7e-84 315.1 375 47.5
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 9.7e-83 311.2 321 51.1
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.6e-82 310.5 321 50.8
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.6e-82 310.5 321 50.8
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 6.3e-82 308.5 316 50.3
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 5.3e-81 305.4 296 54.1
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 2.2e-79 300.1 330 50.6
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 4.2e-78 295.8 296 51.0
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.6e-77 293.9 329 49.8
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.3e-74 284.3 270 54.1
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.7e-74 283.9 318 49.4
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 4.8e-74 282.3 327 49.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.1e-73 281.2 322 44.4
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 5.0e-71 272.3 342 44.2
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 2.1e-69 266.9 323 48.0
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 2.1e-69 266.9 334 43.4
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.4e-65 254.2 256 53.9
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 2.0e-64 250.4 321 44.9
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 7.7e-64 248.4 330 43.0
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.2e-56 224.6 382 36.4
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 7.7e-56 221.9 383 37.6
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.7e-55 220.7 211 55.9
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 3.8e-55 219.5 134 81.3
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.7e-50 204.1 181 59.7
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 1.2e-40 171.4 338 32.5
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 3.8e-39 166.4 133 62.4
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.9e-38 164.1 155 54.8
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.2e-34 150.6 97 70.1
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 2.2e-34 150.6 133 54.9
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 6.4e-34 149.1 221 40.7
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 1.1e-30 138.3 106 65.1
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 2.6e-27 127.1 116 52.6
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 3.5e-24 116.7 115 51.3
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 1.2e-21 108.2 141 44.0
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 4.7e-21 106.3 87 60.9
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 6.8e-20 102.4 90 51.1
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 6.0e-16 89.4 315 25.4
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.0e-16 89.4 69 62.3
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 3.3e-14 83.6 113 43.4
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 4.4e-11 73.2 64 53.1
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 6.0e-08 62.8 51 54.9
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.7e-07 61.2 93 39.8


User provided reference genes

Program Settings